Pinned Repositories
.emacs.d.old
barcodecop
Enforce exact barcode matches in demultiplexed MiSeq reads
beamertemplate
bioy
dada2-cli
A command line wrapper and Dockerfile for dada2
deenurp
16S rRNA gene sequence curation and phylogenetic reference set creation
DiscoSnp
DiscoSnp is designed for discovering all kinds of SNPs (not only isolated ones), as well as insertions and deletions, from raw set(s) of reads.
env_base
simple virtualenv starting point with local R-package installs
illumina_qc
medirect
multiprocessed ncbi edirect
dhoogest's Repositories
dhoogest/beamertemplate
dhoogest/.emacs.d.old
dhoogest/barcodecop
Enforce exact barcode matches in demultiplexed MiSeq reads
dhoogest/bioy
dhoogest/dada2-cli
A command line wrapper and Dockerfile for dada2
dhoogest/deenurp
16S rRNA gene sequence curation and phylogenetic reference set creation
dhoogest/DiscoSnp
DiscoSnp is designed for discovering all kinds of SNPs (not only isolated ones), as well as insertions and deletions, from raw set(s) of reads.
dhoogest/env_base
simple virtualenv starting point with local R-package installs
dhoogest/illumina_qc
dhoogest/medirect
multiprocessed ncbi edirect
dhoogest/mmdb-bootstrap
The most popular HTML, CSS, and JavaScript framework for developing responsive, mobile first projects on the web.
dhoogest/moose
dna/rna alignment classifier
dhoogest/org_template
dhoogest/photobooth
dhoogest/R-reporting
Docker image for generating plots and reports with R
dhoogest/Rmd-base
Base pieces for producing an html report from Rmd using a Singularity image
dhoogest/taxtastic
Create and maintain phylogenetic "reference packages" of biological sequences.
dhoogest/ya16sdb
A curated subset of 16S rRNA sequences from NCBI
dhoogest/zsh
my zsh environment