Pinned Repositories
ncov2019-ont-nf
Nextflow pipeline to process SARS-CoV-2 genomes by Nanopore Sequencing using ARTIC (https://github.com/artic-network/fieldbioinformatics) tools
ont-basecalling-demultiplexing
Nextflow pipeline for basecalling / demultiplexing ONT data, using Dorado
abricate
:mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes
alphafold
Open source code for AlphaFold.
bioconda-recipes
Conda recipes for the bioconda channel.
claudio-inventory
containers
My container collection for using them in bioinformatics pipelines
darwin_webapp
learning-litestar
learning_sqlalchemy
dialvarezs's Repositories
dialvarezs/alphafold
Open source code for AlphaFold.
dialvarezs/abricate
:mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes
dialvarezs/bioconda-recipes
Conda recipes for the bioconda channel.
dialvarezs/claudio-inventory
dialvarezs/containers
My container collection for using them in bioinformatics pipelines
dialvarezs/darwin_webapp
dialvarezs/learning-litestar
dialvarezs/learning_sqlalchemy
dialvarezs/litestar
Light, Flexible and Extensible ASGI API framework | Effortlessly Build Performant APIs
dialvarezs/nanopore-analyses-data-en
🌱 a fast, batteries-included static-site generator that transforms Markdown content into fully functional websites
dialvarezs/obsidian-zola
A no-brainer solution to turning your Obsidian PKM into a Zola site.
dialvarezs/spack
A flexible package manager that supports multiple versions, configurations, platforms, and compilers.
dialvarezs/teaching-r
dialvarezs/mag
Assembly and binning of metagenomes
dialvarezs/nanopore-analyses-data-es-files
dialvarezs/nf-core-modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
dialvarezs/nf-training
Nextflow training material
dialvarezs/seqfu2
:rocket: seqfu - Sequece Fastx Utilities
dialvarezs/sqlite-exercise
dialvarezs/umag-thesis-template