Pinned Repositories
bioconda-recipes
Conda recipes for the bioconda channel.
BTEP
NCI Center for Cancer Research, Bioinformatics Training & Education Program (BTEP)
Collaborative-RStudio-GitHub
FriendsDontLetFriends
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
github_practical_stats
hackathon_TSG_MEN1
Investigation of the differential expression of TSGs in health and disease
HCRProbeMakerCL
HIVsimulation
scripts used for HIV simulation work
insitu_probe_generator
Generate HCR-style Probe Pairs for mRNA visualization
Introduction-Simulations-in-R
Introduction to Simulations in R
dianalir's Repositories
dianalir/bioconda-recipes
Conda recipes for the bioconda channel.
dianalir/BTEP
NCI Center for Cancer Research, Bioinformatics Training & Education Program (BTEP)
dianalir/Collaborative-RStudio-GitHub
dianalir/FriendsDontLetFriends
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
dianalir/github_practical_stats
dianalir/hackathon_TSG_MEN1
Investigation of the differential expression of TSGs in health and disease
dianalir/HCRProbeMakerCL
dianalir/HIVsimulation
scripts used for HIV simulation work
dianalir/insitu_probe_generator
Generate HCR-style Probe Pairs for mRNA visualization
dianalir/Introduction-Simulations-in-R
Introduction to Simulations in R
dianalir/module01_se_day5
Day 5: git and GitHub
dianalir/msprime
A reimplementation of Hudson's classical ms simulator for modern data sets.
dianalir/ncov2019-artic-nf
A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019
dianalir/oneliners
Useful bash one-liners for bioinformatics.
dianalir/shiver
Sequences from HIV Easily Reconstructed
dianalir/single-cell-training_sib-swiss
Website hosted at https://sib-swiss.github.io/single-cell-training/latest/
dianalir/single-cell-tutorial
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
dianalir/training-collectionsebepedroslab
Collection of bioinformatics training materials
dianalir/tsinfer
Infer a tree sequence from genetic variation data
dianalir/tskit
The tree sequence toolkit
dianalir/viralrecon
Assembly and intrahost/low-frequency variant calling for viral samples
dianalir/Workshop_GitHub
Very basic workshop for members of the Solana Lab