Can't add rules for extra target multiqc

[olar785]

Hi there,
I have just installed elvers on a CentOS linux system. It didn't work at first because apparently the latest version of snakemake is looking for a configfiles instead of a configfile. I fixed this by specifying snakemake v5.6.0. in the environment.yml file. Unfortunately, I still have an issue when running the following test command:

elvers examples/nema.yaml default

checking for required files:

Found configfile at /cluster/home/ollilaroche/Programs/elvers/examples/nema.yaml

Error: Can't add rules for extra target multiqc. Please fix.

Any idea how I might fix this issue?
Thanks!

[olar785]

Hi,
When I tried running multiqc by itself I was receiving the following error:
RuntimeError: Click will abort further execution because Python 3 was configured to use ASCII as encoding for the environment
To fix this I did:
export LC_ALL="en_US.UTF-8"
Doing so also fixed the error message I was receiving when running the test command of elvers. All is good now.