Pinned Repositories
dbgi-sapindales
A metabolomics batch of Sapindales JBUF
dendron-dbgi
The Dendron repo
digital-botanical-gardens-initiative.github.io
DBGI website
directus-migration-scripts
earth_metabolome_ontology
The Earth Metabolome Initiative Ontology. The Earth Metabolome Initiative (EMI, https://www.earthmetabolome.org/ ) is a global effort to profile the metabolic content of all currently known species on our planet.
integrate_trydb_globi_enpkg
Integrate TRY db and GLOBI db data with minimal subset of enpkg
ms-metadata-fetcher
qfieldcloud-fetcher
taxonomical-preparator
A set of script to prepare and resolve species lists
wd-ott-checker
The Digital Botanical Garden Initiative's Repositories
digital-botanical-gardens-initiative/dendron-dbgi
The Dendron repo
digital-botanical-gardens-initiative/earth_metabolome_ontology
The Earth Metabolome Initiative Ontology. The Earth Metabolome Initiative (EMI, https://www.earthmetabolome.org/ ) is a global effort to profile the metabolic content of all currently known species on our planet.
digital-botanical-gardens-initiative/taxonomical-preparator
A set of script to prepare and resolve species lists
digital-botanical-gardens-initiative/digital-botanical-gardens-initiative.github.io
DBGI website
digital-botanical-gardens-initiative/integrate_trydb_globi_enpkg
Integrate TRY db and GLOBI db data with minimal subset of enpkg
digital-botanical-gardens-initiative/dbgi-object-manager
A Python package to handle DBGI objects in the Directus DB and issue corrsponding labels
digital-botanical-gardens-initiative/dendron-jbuf
A dendron repo to display the species of the Jardin Botanique de l'Université de Fribourg
digital-botanical-gardens-initiative/directus-migration-scripts
digital-botanical-gardens-initiative/directus-requests
digital-botanical-gardens-initiative/inat_commented_directus
A code to add discussed taxons in inaturalist for the DBGI project. To proceed, takes all the observations that are commented and puts them in a directus table.
digital-botanical-gardens-initiative/label-creator
digital-botanical-gardens-initiative/label_creator
digital-botanical-gardens-initiative/ms-metadata-fetcher
digital-botanical-gardens-initiative/Pictures_manager
Manages the pictures taken with QField an prepare them for the iNaturalist import (Adds coordinates and sample ID in the pictures metadata)
digital-botanical-gardens-initiative/qfieldcloud-fetcher
digital-botanical-gardens-initiative/taxonomical-utils
A set of Python scripts to proceed to taxonomical resolution and retrieval of upper taxonomies.
digital-botanical-gardens-initiative/wd-ott-checker
digital-botanical-gardens-initiative/datacite-api-demo
Demo of DataCite Rest API functionality using Python
digital-botanical-gardens-initiative/dbgi-metabolomics
digital-botanical-gardens-initiative/dbgi-projects
Placeholder repo to handle DBGI Projects issues
digital-botanical-gardens-initiative/dbgi-ro-crate
Sandbox for RO Crate
digital-botanical-gardens-initiative/DBGI_tracking_android
digital-botanical-gardens-initiative/directus-db
The Directus self hosting scripts
digital-botanical-gardens-initiative/frictionless-data-sandbox
A sandbox for FL data
digital-botanical-gardens-initiative/gpkg-creator
digital-botanical-gardens-initiative/inat-fetcher
digital-botanical-gardens-initiative/inaturalist-interact
Testing a Rust client for the iNaturalist API
digital-botanical-gardens-initiative/link-ml-sandbox
LinkML sandbox
digital-botanical-gardens-initiative/ms-sample-list-creator
digital-botanical-gardens-initiative/OZtree
OneZoom Tree of Life Explorer