djoshea
Neuroscience Postdoc @ Neural Prosthetic Systems Lab, Stanford
Stanford UniversityStanford, CA
Pinned Repositories
eraasr
ERAASR: An algorithm for removing electrical stimulation artifacts from multielectrode array recordings
haptic-control
Real-time controller of Force Dimension delta.3 for reaching tasks on Chai3D
matlab-barplot
Automatic bar & violin plots with groups, whiskers, significance bridges
matlab-save-figure
Cross-platform figure export from Matlab to SVG, PDF, PNG, etc. preserving transparency
matlab-utils
Collection of miscellaneous shared utils for Matlab
neuropixel-utils
Utilities for managing Neuropixel datasets and Kilosort results
trial-data
Interfaces and utilities for analysis of neurophysiology and behavioral data
vim-autoread
Have Vim automatically reload a file that has changed externally
vim-matlab-fold
Vim code folding for Matlab files
lfads-run-manager
Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)
djoshea's Repositories
djoshea/vim-autoread
Have Vim automatically reload a file that has changed externally
djoshea/neuropixel-utils
Utilities for managing Neuropixel datasets and Kilosort results
djoshea/matlab-save-figure
Cross-platform figure export from Matlab to SVG, PDF, PNG, etc. preserving transparency
djoshea/matlab-utils
Collection of miscellaneous shared utils for Matlab
djoshea/matlab-barplot
Automatic bar & violin plots with groups, whiskers, significance bridges
djoshea/eraasr
ERAASR: An algorithm for removing electrical stimulation artifacts from multielectrode array recordings
djoshea/obci
Code for real-time, low-latency processing of 2P calcium imaging data streaming from PrairieView
djoshea/matlab-auto-axis
Custom automatically redrawing axis widgets for Matlab figures
djoshea/haptic-control
Real-time controller of Force Dimension delta.3 for reaching tasks on Chai3D
djoshea/trial-data
Interfaces and utilities for analysis of neurophysiology and behavioral data
djoshea/matdb
In memory relational database and database-driven analysis layer for Matlab
djoshea/matlab-imagestack
Lightweight Matlas class which wraps multichannel ImageStacks
djoshea/cvVectorStats
Cross-validated estimation of Euclidean distance (and other multivariate statistics)
djoshea/Kilosort2
Fast spike sorting with drift correction for up to a thousand channels
djoshea/lfads-neural-stitching-reproduce
Code and data to reproduce neural stitching results in LFADS paper
djoshea/sphinxcontrib-matlabdomain
Temporary development clone of sphinxcontrib Matlab Domain
djoshea/matlab-quiver
Matlab interfaces to append text to Quiver notes
djoshea/matudp
Bus communication layer and data logger for Simulink Real Time (xPC Target)
djoshea/mksort
Spike sorter for electrophysiology data
djoshea/seqMultiTaskRNN
sequential learning in orthogonal subspaces
djoshea/vim-dotvim
My personal .vim directory
djoshea/dotFiles
Personal configuration files
djoshea/gollum
A simple, Git-powered wiki with a sweet API and local frontend.
djoshea/imatlab
A Jupyter kernel for MATLAB.
djoshea/matlab-netrep
Matlab port of Generalized Shape Metrics on Neural Representations
djoshea/matlab_kernel
Jupyter Kernel for Matlab
djoshea/models
Models built with TensorFlow
djoshea/pymanopt
Python toolbox for optimization on Riemannian manifolds with support for automatic differentiation
djoshea/quickswitch-for-i3
A python utility to quickly change to and locate windows in i3
djoshea/teetool
a package to support with the statistical analysis of trajectory data