dkleftogi
I am working with different omics datasets. Here, I am sharing some tools for the analysis of NGS, CyTOF and IMC data.
NeuroSysMedBergen
Pinned Repositories
AmpliSolve
Identification of single nucleotide variants using position-specific error estimation in deep sequencing data
cfDNA_AnalysisPipeline
Analysis of cfDNA data with UMIs (consensus generation, SNV calling, annotation and evaluation of fragment length profiles)
duplexFiltering
duplex DNA molecule identification tool for ultra-sensitive SNV detection
IMC_DataAnalysis
Simple workflow for IMC data exploration, annotation and visualisation of single-cells
NGS_utilities
Collection of programs for processing and manipulating NGS data
singleCellClassification
Single cell classification and feature engineering using DREMI scores
dkleftogi's Repositories
dkleftogi/cfDNA_AnalysisPipeline
Analysis of cfDNA data with UMIs (consensus generation, SNV calling, annotation and evaluation of fragment length profiles)
dkleftogi/singleCellClassification
Single cell classification and feature engineering using DREMI scores
dkleftogi/duplexFiltering
duplex DNA molecule identification tool for ultra-sensitive SNV detection
dkleftogi/AmpliSolve
Identification of single nucleotide variants using position-specific error estimation in deep sequencing data
dkleftogi/NGS_utilities
Collection of programs for processing and manipulating NGS data
dkleftogi/IMC_DataAnalysis
Simple workflow for IMC data exploration, annotation and visualisation of single-cells