dlce-eva/python-nexus

Issues

• refactor combine_nexuses

  #42 opened a year ago by SimonGreenhill
  6

• Loading of Nexus files fails at attempting to decode `utf-8` data

  #36 opened 2 years ago by codedump
  5

• Round tripping a nexus with a characters block leads to two character blocks

  #26 opened 3 years ago by SimonGreenhill
  4

• #NEXUS should be on first line

  #25 opened 3 years ago by xrotwang
  1

• nexus trees -n should accept a random seed option

  #24 opened 3 years ago by xrotwang
  3

• Distances

  #23 opened 3 years ago by advanced373
  2

• Support for non-interleaved Nexus format?

  #21 opened 4 years ago by mvences
  6

• loglevel.WARN not handled in `trees` subcommand?

  #19 opened 4 years ago by SimonGreenhill
  5

• Support reading nexus from stdin where appropriate

  #17 opened 5 years ago by xrotwang
  2

• Refactor for 2.0

  #13 opened 5 years ago by xrotwang
  18

• Breaking changes

  #14 opened 5 years ago by xrotwang
  2

• Enhanced tree handling

  #16 opened 5 years ago by xrotwang
  0

• Parsing trees?

  #7 opened 5 years ago by tresoldi
  1

• django.core.context_processors depreceated?

  #12 opened 5 years ago by SamPassmore
  2

• NexusReader.write() output is not consistent

  #2 opened 5 years ago by SimonGreenhill
  0

• ImportError: cannot import name bin

  #10 opened 6 years ago by wenheping
  5

• DataHandler.write() adds ? to symbols

  #4 opened 7 years ago by SimonGreenhill
  0

• DataHandler.write() loses character labels.

  #3 opened 7 years ago by SimonGreenhill
  0

• Refactor DataHandler

  #5 opened 7 years ago by SimonGreenhill
  1

• Initial Update

  #9 opened 8 years ago by pyup-bot
  0

• UnboundLocalError: local variable 'found_ntaxa' referenced before assignment

  #1 opened 9 years ago by xrotwang
  3