dmarcbriers
Bioinformatics PhD Candidate at Boston University. Experience modeling biophysical systems, full stack development, cloud computing, mobile VR
Boston, MA
Pinned Repositories
2015-05-12-BUSM-git
bootstrap-wysiwyg
Tiny bootstrap-compatible WISWYG rich text editor
Cell_Model
Collection of Code for an Agent Based Cellular Model
CFDPython
A sequence of Jupyter notebooks featuring the "12 Steps to Navier-Stokes" http://lorenabarba.com/
combat.py
python / numpy / pandas / patsy version of ComBat for removing batch effects.
cytoflow
A Python toolbox for quantitative, reproducible flow cytometry analysis
fpm
Effing package management! Build packages for multiple platforms (deb, rpm, etc) with great ease and sanity.
KEGG-Crawler
A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.
Multicellular-Pattern-Synthesis
populartimes
dmarcbriers's Repositories
dmarcbriers/Multicellular-Pattern-Synthesis
dmarcbriers/combat.py
python / numpy / pandas / patsy version of ComBat for removing batch effects.
dmarcbriers/populartimes
dmarcbriers/2015-05-12-BUSM-git
dmarcbriers/bootstrap-wysiwyg
Tiny bootstrap-compatible WISWYG rich text editor
dmarcbriers/Cell_Model
Collection of Code for an Agent Based Cellular Model
dmarcbriers/CFDPython
A sequence of Jupyter notebooks featuring the "12 Steps to Navier-Stokes" http://lorenabarba.com/
dmarcbriers/cytoflow
A Python toolbox for quantitative, reproducible flow cytometry analysis
dmarcbriers/fpm
Effing package management! Build packages for multiple platforms (deb, rpm, etc) with great ease and sanity.
dmarcbriers/KEGG-Crawler
A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.
dmarcbriers/luigi
Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.
dmarcbriers/machine_learning_examples
A collection of machine learning examples and tutorials.
dmarcbriers/MECAGEN
dmarcbriers/openSleep
platform for sleep hacking and research
dmarcbriers/pathos
parallel graph management and execution in heterogeneous computing
dmarcbriers/PathoScope
Pathoscope: Species identification and strain attribution with unassembled sequencing data
dmarcbriers/PCSF
dmarcbriers/simple-health-example
Simple health app that shows multiple type of health data from the HealthService API.
dmarcbriers/social-distancing
social distancing project from pydata Boston hackathon march 220
dmarcbriers/softcarp_bumed
test repo for software carpentry workshop
dmarcbriers/Swarmathon-Robot
Everything you need to build a Swarmathon Robot.