dnasko

dnasko's Stars

• omgenomics/bio-data-zoo

  Example genomics data for tool developers

  Language:Shell922

• PacificBiosciences/pb-metagenomics-tools

  Tools and pipelines tailored to using PacBio HiFi Reads for metagenomics

  Language:HTML16433

• williamrowell/srWGS-deepvariant-happy-snakemake

  Language:Python2

• zyxue/ncbitax2lin

  🐞 Convert NCBI taxonomy dump into lineages

  Language:Python13829

• grenaud/deML

  Maximum likelihood demultiplexing

  Language:C++4613

• mooreryan/zach

  ¡¡ZACH ATTACK!!

  Language:C2

• mooreryan/iroki_cli

  NOTE: The iroki command line tool is no longer maintained. Please see: https://github.com/mooreryan/iroki

  Language:Ruby9

• blab/nextflu

  Real-time tracking of influenza evolution

  Language:JavaScript8819

• simroux/VirSorter

  Source code of the VirSorter tool, also available as an App on CyVerse/iVirus (https://de.iplantcollaborative.org/de/)

  Language:Perl10430

• soedinglab/MMseqs2

  MMseqs2: ultra fast and sensitive search and clustering suite

  Language:C1.4k190

• jorvis/ergatis

  Ergatis is a web-based utility that is used to create, run, and monitor reusable computational analysis pipelines.

  Language:Perl1515

• dnasko/frameshift_polisher

  BLAST-driven pipeline for polishing out pesky frame shifts -- particularly in PacBio reads.

  Language:Perl41

• dnasko/rubble

  A blast-based protein homology pipeline

  Language:Perl51

• mooreryan/chopyk_neighborhoods

  Chop Chop Chopyks!

  Language:Ruby1

• dnasko/CASC

  CASC Ain't Simply CRT

  Language:Perl11