dr-richard-barker
Astro-Botany Researcher. About me 🌱 I’m a former genetic engineer and self-taught bioinformatician. 🔠I’m currently working for NASA Open Science Archive
Blue Marble Space Institute of ScienceMadison, Wisconsin, USA
Pinned Repositories
3D_clinostat
Insight Wisconsin 3D clinostat
image-analysis-software-and-R-codes
This software and statisical analysis repositry is deisnged to make plant image analysis easier
LinearRobotGUI
Interface for controlling the Gilroy Lab's linear robot
MATRIX5_pseudo_time-series
MATRIX5 metadata for GeneLab Plant AWG meta-analysis
NASA-GeneLab--MicroArray-Codes
These rough R codes have been used to analyze transcriptomic and plant physiological data as part of the Gilroy NASA GeneLab program at the University of Madison-Wisconsin.
Settlers_of_Mars_3D_LLM
3D modeles for settlers of Mars board game
Space_Biology_and_AstroBotany.io
Space Biology and AstroBotany.io has the goal of making space biology data more FAIR. Test website creation methods.
Space_Biology_Photography_Guide.io
AstroBiology Photography Training Guide for Transforming to Open Science and Growing Beyond Earth
The-Matrix-2022
Code used during The NASA GeneLab Plant Analysis Working Group Matrix analysis
swcarpentry-workflows-in-practice
dr-richard-barker's Repositories
dr-richard-barker/Settlers_of_Mars_3D_LLM
3D modeles for settlers of Mars board game
dr-richard-barker/NASA-GeneLab--MicroArray-Codes
These rough R codes have been used to analyze transcriptomic and plant physiological data as part of the Gilroy NASA GeneLab program at the University of Madison-Wisconsin.
dr-richard-barker/3D_clinostat
Insight Wisconsin 3D clinostat
dr-richard-barker/LinearRobotGUI
Interface for controlling the Gilroy Lab's linear robot
dr-richard-barker/MATRIX5_pseudo_time-series
MATRIX5 metadata for GeneLab Plant AWG meta-analysis
dr-richard-barker/Microbiome_seedlings_in_space
dr-richard-barker/Space_Biology_and_AstroBotany.io
Space Biology and AstroBotany.io has the goal of making space biology data more FAIR. Test website creation methods.
dr-richard-barker/Space_Biology_Photography_Guide.io
AstroBiology Photography Training Guide for Transforming to Open Science and Growing Beyond Earth
dr-richard-barker/swcarpentry-workflows-in-practice
dr-richard-barker/The-Matrix-2022
Code used during The NASA GeneLab Plant Analysis Working Group Matrix analysis
dr-richard-barker/Training_LLM_game-theory_using_bloodbowl
Exploring the use of LLM’s to design and assist with the playing of board games like blood bowl and warhammer gaming narratives.
dr-richard-barker/image-analysis-software-and-R-codes
This software and statisical analysis repositry is deisnged to make plant image analysis easier
dr-richard-barker/biojupies-plugins
User-submitted RNA-seq data analysis tools for BioJupies.
dr-richard-barker/Flashlapse_NEO
dr-richard-barker/GeneLab_API_Tutorial
GeneLab_API_tutorial
dr-richard-barker/GeneLabUserManual
dr-richard-barker/KEGG_pathway_APEX05
KEGG codes used during the analysis of APEX05
dr-richard-barker/LinearRobot
This robot is designed to be an cheap, agile, high-throughput platform for researchers to be able to automatically phenotype plants.
dr-richard-barker/Lunar_regolith_AWG
Lunar_regolith_NF_core_counts
dr-richard-barker/MapMaking
R scripts for making map images
dr-richard-barker/miRDeep-P2_pipeline
dr-richard-barker/mirDeep2_accuracy_test_with_synthetic_microRNA
mirDeep2_DRB_exploration contains some codes and files created while testing mirDeep2
dr-richard-barker/Plants_AWG
dr-richard-barker/R-codes-for-Arabidopsis-microarray-analysis
These codes were developed in collaboration in order to analyzse data from the NASA GeneLab depositry.
dr-richard-barker/r-notebooks
dr-richard-barker/RStudyGroup
ComBEE R Study Group @ UW-Madison
dr-richard-barker/smallRNA_targets
Simple code designed to search for microRNA targets
dr-richard-barker/SRNA_toolbox
This code repository is being developed as part of the new GeneLab small RNAseq pipeline. I'm trying to get the sRNA_toolbox to work via command line.
dr-richard-barker/TICTOC
Targeting Improved Cotton Through Orbital Cultivation (TICTOC)
dr-richard-barker/web-glyphics
ArUco 'hieroglyphics' application for web use.