Pinned Repositories
aug_phoni
Computing matching statistics with compressed data structures
drnatebrown.github.io
klib
A standalone and lightweight C library
Movi
Fast and cache-efficient full-text pangenome index
mumemto
Multi-MUM and MEM finding across collections of sequences
pfp-thresholds
Computing thresholds from Prefix-free parsing
r-index-f
R-Index-F Library for Pattern Matching
r-permute
O(r)-space lookup table for "runny" permutations
spumoni
Pan-Genomic Matching Statistics
drnatebrown's Repositories
drnatebrown/r-index-f
R-Index-F Library for Pattern Matching
drnatebrown/aug_phoni
Computing matching statistics with compressed data structures
drnatebrown/r-permute
O(r)-space lookup table for "runny" permutations
drnatebrown/drnatebrown.github.io
drnatebrown/klib
A standalone and lightweight C library
drnatebrown/Movi
Fast and cache-efficient full-text pangenome index
drnatebrown/mumemto
Multi-MUM and MEM finding across collections of sequences
drnatebrown/pfp-thresholds
Computing thresholds from Prefix-free parsing
drnatebrown/spumoni
Pan-Genomic Matching Statistics