dstern

BatchSongAnalysis

Batch analysis of _out files resulting from FlySongSegmenter

DisambiguateGenomes

A Python script to convert polymorphic sites into Ns between two genomes of identical length.

ExtractFlankingSequence

extract internal or external sequence from mapped reads in sam file

FlySongClusterSegment

Gordon Berman's approach to fly song segmentation

grepfqparse

Parse fastq files by variable length barcodes using grep

indel_probes

Make oligo probes for gDNA array hybridization

noIPIcycles

code and data for Stern et al. (2017)

pull_thin

Starting with tsv files from MSG, pull requested individuls and thin data

read_cross_msg

Import MSG tsv files into r-qtl

TagMap

dstern/pull_thin

Starting with tsv files from MSG, pull requested individuls and thin data

dstern/FlySongClusterSegment

Gordon Berman's approach to fly song segmentation

dstern/indel_probes

Make oligo probes for gDNA array hybridization

dstern/read_cross_msg

Import MSG tsv files into r-qtl

dstern/TagMap

dstern/BatchSongAnalysis

Batch analysis of _out files resulting from FlySongSegmenter

dstern/DisambiguateGenomes

A Python script to convert polymorphic sites into Ns between two genomes of identical length.

dstern/ExtractFlankingSequence

extract internal or external sequence from mapped reads in sam file

dstern/grepfqparse

Parse fastq files by variable length barcodes using grep

dstern/noIPIcycles

code and data for Stern et al. (2017)

dstern/SongExplorer

deep learning for acoustic signals