dtm2451
T cell biologist turned Biological Data Scientist
University of California, San FranciscoSan Francisco, CA
Pinned Repositories
awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
BiocStickers
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
ComplexHeatmap
Make Complex Heatmaps
dittoSeq
Color blindness friendly visualization of single-cell and bulk RNA-sequencing data
dittoViz
Color blindness friendly visualization of any data in a data.frame format. Like dittoSeq, but not omics-structure restricted
EndometrialDeconvolution
Code to go along with a manuscript in press
ProgressiveHematopoiesis
Code to go along with a manuscript: Bunis, et. al., Cell Reports, 2021.
RNAseqPlotR
A set of functions built for analysis and visualization (color blindness friendly) of single-cell and bulk RNA-sequencing data
WIP-vignettes
SingleR
Clone of the Bioconductor repository for the SingleR package.
dtm2451's Repositories
dtm2451/dittoSeq
Color blindness friendly visualization of single-cell and bulk RNA-sequencing data
dtm2451/ProgressiveHematopoiesis
Code to go along with a manuscript: Bunis, et. al., Cell Reports, 2021.
dtm2451/dittoViz
Color blindness friendly visualization of any data in a data.frame format. Like dittoSeq, but not omics-structure restricted
dtm2451/RNAseqPlotR
A set of functions built for analysis and visualization (color blindness friendly) of single-cell and bulk RNA-sequencing data
dtm2451/EndometrialDeconvolution
Code to go along with a manuscript in press
dtm2451/WIP-vignettes
dtm2451/awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
dtm2451/BiocStickers
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
dtm2451/ComplexHeatmap
Make Complex Heatmaps
dtm2451/SCEGallery
Pretty plotting for SCE objects.
dtm2451/scRNAseq
Clone of the Bioconductor repository for the scRNAseq package.
dtm2451/seurat
R toolkit for single cell genomics
dtm2451/SingleR
Clone of the Bioconductor repository for the SingleR package.
dtm2451/SingleR-1
SingleR: Single-cell RNA-seq cell types Recognition (legacy version)