Pinned Repositories
COVID-EWS
Data, code and results from O'Brien D.A. and Clements C.F., 2021, Early warning signal reliability varies with COVID-19 waves, Biology Letters, 17:20210487, https://doi.org/10.1098/rsbl.2021.0487.
deep-early-warnings-pnas
critical transitions, early warning signals, dynamical systems, theoretical ecology, machine learning
duncanobrien.github.io
ews-assessments
Data, code and results from O'Brien D.A., Deb S., Gal G., Thackeray S.J., Dutta P.S., Matsuzaki S.S., May L. & Clements C.F. 2023. Early warning signals have limited applicability to empirical lake data.
EWSmethods
EWSmethods: an R package to forecast tipping points at the community level using early warning signals and machine learning models
lpi-multivariate-res
open-datasets
Repository to store data produced by Duncan O'Brien (Twitter - @duncanobrienn) and collaborators.
plankton-FD
Data, code and results from O'Brien D.A., Gal G., Thackeray S.J., Matsuzaki S.S & Clements C.F. 2022. Planktonic functional diversity changes in synchrony with lake ecosystem state.
Fluctuating_temperatures
Generated data, code and results from Wolfe E., Cerini F., Besson M., O’Brien DA. and Clements CF. 2022. Spatiotemporal thermal variation drives diversity trends in experimental landscapes
ordbetareg_pack
Repository for R package ordbetareg, used to fit continuous data with lower and upper bounds.
duncanobrien's Repositories
duncanobrien/EWSmethods
EWSmethods: an R package to forecast tipping points at the community level using early warning signals and machine learning models
duncanobrien/COVID-EWS
Data, code and results from O'Brien D.A. and Clements C.F., 2021, Early warning signal reliability varies with COVID-19 waves, Biology Letters, 17:20210487, https://doi.org/10.1098/rsbl.2021.0487.
duncanobrien/deep-early-warnings-pnas
critical transitions, early warning signals, dynamical systems, theoretical ecology, machine learning
duncanobrien/duncanobrien.github.io
duncanobrien/ews-assessments
Data, code and results from O'Brien D.A., Deb S., Gal G., Thackeray S.J., Dutta P.S., Matsuzaki S.S., May L. & Clements C.F. 2023. Early warning signals have limited applicability to empirical lake data.
duncanobrien/lpi-multivariate-res
duncanobrien/open-datasets
Repository to store data produced by Duncan O'Brien (Twitter - @duncanobrienn) and collaborators.
duncanobrien/plankton-FD
Data, code and results from O'Brien D.A., Gal G., Thackeray S.J., Matsuzaki S.S & Clements C.F. 2022. Planktonic functional diversity changes in synchrony with lake ecosystem state.