Pinned Repositories
book
cellrouter
Reconstruction of complex single-cell trajectories using CellRouter
COVID19
leidenbase
monocle3
MuSiC
Multi-subject Single Cell Deconvolution
pySCENIC
pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.
Python
My Python Examples
SCENIC
SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.
SCENICprotocol
A scalable SCENIC workflow for single-cell gene regulatory network analysis
duosu's Repositories
duosu/book
duosu/cellrouter
Reconstruction of complex single-cell trajectories using CellRouter
duosu/COVID19
duosu/leidenbase
duosu/monocle3
duosu/MuSiC
Multi-subject Single Cell Deconvolution
duosu/pySCENIC
pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.
duosu/Python
My Python Examples
duosu/SCENIC
SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.
duosu/SCENICprotocol
A scalable SCENIC workflow for single-cell gene regulatory network analysis
duosu/scvelo_notebooks
duosu/single-cell-papers-with-code
Papers with code for single cell related papers
duosu/singleCellNet
SingleCellNet: classify single cells across species and platforms
duosu/SingleR
SingleR: Single-cell RNA-seq cell types Recognition (legacy version)
duosu/STREAM
STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data
duosu/URD
URD - Reconstruction of Branching Developmental Trajectories