Pinned Repositories
BiocSwirl
BiocSwirl is a series of in-depth swirlify generated courses used to teach bioinformatics workflows in R/Bioconductor using an interactive and easy to digest format. This project was the People's Choice Award for the Vancouver Bioinformatics Hackathon Hackseq2019.
BioinformaticsIntroduction
Tutorials to get started in bioinformatics
BioinformaticsIntroduction-archived
CIRCexplorer
A combined strategy to identify circular RNAs (circRNAs and ciRNAs) (Zhang et al., Complementary Sequence-Mediated Exon Circularization, Cell (2014), 159:134-147)
dqRNASeq
Bioo Scientific Molecular Indexing Analysis
e-hutchins.github.io
KNIFE
Known and Novel IsoForm Explorer. Statistically based splicing detection for circular and linear isoforms
ngs-protocols
Scripts to run several protocols to process and analyze Next-Generation Sequencing data
SIRVsuite
SIRVsuite is a command line tool to QC an RNA-Seq workflow using Lexogen's SIRV spike-in controls.
ppmi-qc-wt-paper
QC of whole blood whole transcriptome for PPMI
e-hutchins's Repositories
e-hutchins/dqRNASeq
Bioo Scientific Molecular Indexing Analysis
e-hutchins/BioinformaticsIntroduction
Tutorials to get started in bioinformatics
e-hutchins/BioinformaticsIntroduction-archived
e-hutchins/CIRCexplorer
A combined strategy to identify circular RNAs (circRNAs and ciRNAs) (Zhang et al., Complementary Sequence-Mediated Exon Circularization, Cell (2014), 159:134-147)
e-hutchins/KNIFE
Known and Novel IsoForm Explorer. Statistically based splicing detection for circular and linear isoforms
e-hutchins/ngs-protocols
Scripts to run several protocols to process and analyze Next-Generation Sequencing data
e-hutchins/SIRVsuite
SIRVsuite is a command line tool to QC an RNA-Seq workflow using Lexogen's SIRV spike-in controls.
e-hutchins/e-hutchins.github.io