/COVID19_Citation_Frames

A Meta-Analysis of COVID-19 Literature through Citation Frames

Primary LanguageJupyter Notebook

A Meta-Analysis of Scientific Literature on COVID-19 through Citation Frames

Getting started

Download the CORD-19 dataset from here. The data should be in ./cord19.

Install dependencies:

python -m venv venv
source venv/bin/activate
pip install --upgrade pip setuptools
pip install -r requirements.txt

Start neo4j server (only needed if running analysis and plotting neo4j graph):

bash neo4j-community-4.1.2/bin/neo4j start

Run jupyter and open notebook:

jupyter notebook

To reproduce the results, follow the steps below:

  1. Fine-tune SciBERT on SciCite (citation_intent_classification.ipynb)
  2. Process the CORD-19 data (process_data.ipynb)
  3. Run the anaylsis (analysis.ipynb)