Pinned Repositories
2021_summer_school_bioinf
Bioinformatics summer school 2021
academic-supervision-questionnaire
allelecounter
Counts the number of reads which map to either the reference or alternate allele at each heterozygous SNP.
bioinformatics
Bioinformatics
iecor
Kaggle_TUT_Copper_Analysis
Second place submission to "TUT Copper Analysis Challenge" https://inclass.kaggle.com/c/copper-analysis
kuura_pipeline
WGS and WES data analysis pipeline
presentations
Reproducibility_via_Snakemake-
Lab meeting presentation: Creating Reproducible Bioinformatics Pipelines using Snakemake
Segmentum
Segmentum a fast tool for copy number analysis of cancer genome
eafyounian's Repositories
eafyounian/bioinformatics
Bioinformatics
eafyounian/Kaggle_TUT_Copper_Analysis
Second place submission to "TUT Copper Analysis Challenge" https://inclass.kaggle.com/c/copper-analysis
eafyounian/presentations
eafyounian/academic-supervision-questionnaire
eafyounian/allelecounter
Counts the number of reads which map to either the reference or alternate allele at each heterozygous SNP.
eafyounian/Reproducibility_via_Snakemake-
Lab meeting presentation: Creating Reproducible Bioinformatics Pipelines using Snakemake
eafyounian/AS_variant_pipeline
Allele specific variant pipeline
eafyounian/bds-files
Supplementary files for my book, "Bioinformatics Data Skills"
eafyounian/bioinfo-notebook
🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.
eafyounian/Bioinformatics-BTK2300
Bioinformatics (BTK2300) course
eafyounian/biojupies-plugins
User-submitted RNA-seq data analysis tools for BioJupies.
eafyounian/Blacklist
Application for making ENCODE Blacklists
eafyounian/Breathless_at_CEH
Bioinformatics digital escape room
eafyounian/CoolBox
Jupyter notebook based genomic data visualization toolkit.
eafyounian/crossword_generator
A Python-based crossword puzzle generator.
eafyounian/cruk-summer-school-2019
Summer School 2019 - Functional Genomics
eafyounian/get_areena_sub
Retrieve subtitles from Yle Areena
eafyounian/Intro-Cultural-Analytics
Introduction to Cultural Analytics & Python, course website and online textbook powered by Jupyter Book
eafyounian/jupyter-book
Build interactive, publication-quality documents from Jupyter Notebooks
eafyounian/labs
Rmd source files for the HarvardX series PH525x
eafyounian/lenlaurito.github.io
eafyounian/Nearest_Template_Prediction
This is a library of Nearest Template Prediction(NTP) method for python
eafyounian/numerical-linear-algebra
Free online textbook of Jupyter notebooks for fast.ai Computational Linear Algebra course
eafyounian/phred_score_converter
Phred score to probability converter
eafyounian/pypette
Pythonic utilities for the analysis of high throughput sequencing data
eafyounian/r4ds
R for data science: a book
eafyounian/RegSNPs-ASB
RegSNPs-ASB
eafyounian/reproducible_research_presentation
Reproducible research presentation for the Cancer Research Seminar
eafyounian/tampere-university-logos
This project includes logos for new Tampere University and images for slogan as well as source codes for creating logos
eafyounian/the-art-of-command-line
Master the command line, in one page