GO Term Chart Service
hexylena opened this issue · 4 comments
Hi EBI,
We would very much like to run a local copy of this service (and not abuse your's). I'm seeing urls going to /services/chart and /services/chartfull in the template and associated controller.
However, I am not seeing these services represented in the QuickGoBE project. Is the ontology graph service code somewhere else accessible?
(Also wanted to say, amazing work on the new QuickGO, it looks great and functions perfectly. This project even seems to be a good resource for how to do some of the more complex things with angular.)
Hi Eric,
The code that you see in QuickGOBE is an ongoing major redesign of the current Beta version. We have opted to redesign the backend so that we can make it more scalable and to obtain even faster response times. The current code base is still under heavy development, and features are being added to it on a daily basis.
The ancestor chart, that you mentioned, is something we will starting adding next month. I apologize for this. We will try and anticipate its release if we can.
With the redesign we have also changed the naming of the REST endpoints to something one would expect from a REST service. We have started making changes to the QuickGOFE code base to mirror these URL changes, you can see the latest changes on the alpha branch.
Let us know if you have any further questions.
Regards,
The QuickGO team
From: Eric Rasche notifications@github.com
Sent: Tuesday, August 2, 2016 3:59 PM
To: ebi-uniprot/QuickGoFE
Subject: [ebi-uniprot/QuickGoFE] GO Term Chart Service (#98)
Hi EBI,
We would very much like to run a local copy of this service (and not abuse your's). I'm seeing urls going to /services/chart and /services/chartfull in the templatehttps://github.com/ebi-uniprot/QuickGoFE/blob/master/app/charts/ontologyGraphModal.html and associated controller.
However, I am not seeing these services represented in the QuickGoBE project. Is the ontology graph service code somewhere else accessible?
(Also wanted to say, amazing work on the new QuickGO, it looks great and functions perfectly. This project even seems to be a good resource for how to do some of the more complex things with angular.)
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Hey @rantunesboreas,
Just wanted to follow up and see if the ancestor chart was available yet. :) No pressure from us, we're just excited at the possibility of deploying that service locally.
Hi Eric,
Sorry for the late reply. We are busy trying to finalize our latest major release. This release should see our beta backend almost completely replaced with the version we have on github.
As for the ancestor chart we have released it. It is not yet to our liking, but you can find the endpoint that hosts it in:
under the getChart() method.
You can access a live test version on:
http://wwwdev.ebi.ac.uk/QuickGO/services/ontology/go/terms/GO:0006600/chart
However this version is used by us for development, so it can go down without warning.
We should release our new beta version by the end of next month, if everything goes to plan.
Regards,
Ricardo
From: Eric Rasche notifications@github.com
Sent: Monday, October 17, 2016 7:22 PM
To: ebi-uniprot/QuickGoFE
Cc: Ricardo Antunes; Mention
Subject: Re: [ebi-uniprot/QuickGoFE] GO Term Chart Service (#98)
Hey @rantunesboreashttps://github.com/rantunesboreas,
Just wanted to follow up and see if the ancestor chart was available yet. :) No pressure, we're just excited at the possibility of deploying that service locally.
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