/mindb

Minimal Kraken database, for testing

Primary LanguageMakefile

# Author: Erik Clarke
# Date: 2016-12-13

This is a test database for Kraken. It contains exactly one sequence, the genome
of Adeno-associated virus 1 (NC_002077).  These are the commands used to build
it:

kraken-build --db mindb --add-to-library NC_002077.fna
kraken-build --db mindb --download-taxonomy
kraken-build --db mindb --build --kmer-len 16 --minimizer-len 3
kraken-build --db mindb --clean