ecresp1el

ecresp1el's Stars

• neural-data-science/NESC_3505_textbook

  Textbook for NESC 3505, Neural Data Science, at Dalhousie University

  Language:Jupyter Notebook9847

• ecresp1el/lmc_spikes_crespoetal2023

  Language:Jupyter Notebook1

• zhiwen10/AllenNeuropixelsData

  visualization and analysis of Allen Nueorpixels dataset

  Language:Jupyter Notebook1

• Hochgeschwender-Lab/SpikeTurnpike

  The BL-OG Lab single-unit analysis pipeline, with a side of multi-unit analysis. Phy sold separately.

  Language:MATLAB2

• zstoebs/neural_dim_reduction

  Project on classification dimensionality reduction using neural data

  Language:Jupyter Notebook2

• swharden/pyABF

  pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files

  Language:Jupyter Notebook10434

• swharden/SWHLab

  Python tools for analysis of whole-cell patch-clamp electrophysiological data

  Language:Python238

• ETHZ-INS/DLCAnalyzer

  R Scripts to analyze deep lab cut point data and related data

  Language:R6316

• auto-pi-lot/autopilot

  Distributed behavioral experiments

  Language:Python9323

• BIPN162/Overview

  Overview of the course, syllabus, etc.

  141

• misterGF/CoPilot

  Responsive Bootstrap 3 Admin Template based on AdminLTE with vue.js

  Language:HTML2.9k713

• DeepLabCut/DeepLabCut-live

  SDK for running DeepLabCut on a live video stream

  Language:Python19449

• broadinstitute/CellBender

  CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.

  Language:Python30457

• Franka-van-der-Linden/Quantitative-Calcium-Imaging

  Language:R1

• slinderman/stats320

  STATS320: Statistical Methods for Neural Data Analysis

  Language:Jupyter Notebook19231

• shanemomara/NeuroChaT

  Analysis toolset with GUI for Neuroscience

  Language:Python5

• BugajLab/optoPlate-96

  All design files and scripts necessary for the construction and use of the optoPlate-96

  Language:C++113

• flatironinstitute/labbox-ephys

  Language:TypeScript45

• datastacktv/data-engineer-roadmap

  Roadmap to becoming a data engineer in 2021

  12.5k1.3k

• napari/napari

  napari: a fast, interactive, multi-dimensional image viewer for python

  Language:Python2.2k428

• MouseLand/cellpose

  a generalist algorithm for cellular segmentation with human-in-the-loop capabilities

  Language:Jupyter Notebook1.4k413

• ebatty/MathToolsforNeuroscience

  Materials for Mathematical Tools for Neuroscience course at Harvard (Neurobio 212)

  Language:Jupyter Notebook44462

• c-bun/Prescher-Lab-Site

  Website for the Prescher Lab at UCI. Written with Jekyll and Bootstrap.

  Language:HTML13

• charlesfrye/AppliedStatisticsForNeuroscience

  Materials for UC Berkeley Neuroscience 299

  Language:Jupyter Notebook5318

• p2jones/cheatsheets

  Official Matplotlib cheat sheets

  Language:Python1

• SpikeInterface/spikeextractors

  Python-based module for extracting from, converting between, and interfacing with many common file formats in extracellular recording.

  Language:Python11648

• BIPN162/Materials

  In-class notebooks and other useful materials.

  Language:Jupyter Notebook1915

• RMS-DAIM/Python-for-Bioimage-Analysis

  This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biological imaging.

  Language:Jupyter Notebook13344

• ChasNelson1990/python-zero-to-hero-beginners-course

  Materials for a Python Beginner's Course. First given at the Royal Society of Biology. Designed and delivered by Chas Nelson and Mikolaj Kundegorski.

  Language:Jupyter Notebook4320

• DeepLabCut/DeepLabCut-Workshop-Materials

  Workshop material for using DeepLabCut

  Language:Jupyter Notebook14136