edemmott
Reader/Wellcome CDA fellow at the Centre for Proteome Research, UoL, interested in viruses, protein synthesis, and mass spec-based proteomics.
University of LiverpoolLiverpool, UK
Pinned Repositories
2018-Mar-02-SWCworkshop
BCA_assay_analysis
Matlab functions for processing 96 well BCA protein assay results from Spectramax or Perkin Elmer Kaleido software.
ComBatHarmonization
Harmonization of multi-site imaging data with ComBat
mqLiveLogParser
Matlab script for interpreting Maxquant.Live log files generated through use of the targeting app.
Polysome_Gradients
Matlab scripts/functions for analysing polysome profiles produced on a Biocomp gradientmaster/frationator.
rnaPUFdomains
Perl script for designing PUF domains to bind specific RNA sequences of interest
TMTtargMatlab
Matlab functions for generating targeting lists for TMT data for use with Xcalibur or Maxquant.Live from Maxquant evidence.txt files
scp
Single cell proteomics data processing
AlhatlaniRNAIP_2022
Code repository for the Alhatlani et al. 2022 manuscript on cellular factors interacting with the 5' SARS-CoV-2 or MERS-CoV RNAs.
sars2_3c
Repository for Matlab code generated during data analysis as part of a collaboration on SARS-CoV-2 3c protein
edemmott's Repositories
edemmott/TMTtargMatlab
Matlab functions for generating targeting lists for TMT data for use with Xcalibur or Maxquant.Live from Maxquant evidence.txt files
edemmott/ComBatHarmonization
Harmonization of multi-site imaging data with ComBat
edemmott/mqLiveLogParser
Matlab script for interpreting Maxquant.Live log files generated through use of the targeting app.
edemmott/rnaPUFdomains
Perl script for designing PUF domains to bind specific RNA sequences of interest
edemmott/2018-Mar-02-SWCworkshop
edemmott/BCA_assay_analysis
Matlab functions for processing 96 well BCA protein assay results from Spectramax or Perkin Elmer Kaleido software.
edemmott/Polysome_Gradients
Matlab scripts/functions for analysing polysome profiles produced on a Biocomp gradientmaster/frationator.