Pinned Repositories
replay_trajectory_classification
State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data
spectral_connectivity
Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data
Better-Science-Code
A presentation on best coding/data management practices based on my own experiences of scientific computing and data analysis and heavily borrowing from the recommendations of many others. View presentation at: https://edeno.github.io/Better-Science-Code
d3-save-svg
Extracts an SVG node and accompanying styles from an HTML document and allows you to download it all as an SVG file.
Jadhav-2016-Data-Analysis
Code for analysis on data from Jadhav et al. 2016
pose_analysis
trajectory_analysis_tools
Tools to analyze the decoded posterior probability of position
spyglass
Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
RasterVis
An interactive web-based neuroscience app for analyzing electrophysiological spiking along many different dimensions for many different neurons.
SpectraVis
An interactive web-based neuroscience app for analyzing task-related functional networks over time and frequency
edeno's Repositories
edeno/trajectory_analysis_tools
Tools to analyze the decoded posterior probability of position
edeno/pose_analysis
edeno/release_pypi_conda
edeno/analysis_template
Python template for data analysis
edeno/edeno
edeno/package_template
Python template for data analysis packages
edeno/replicate_kenny_analysis
edeno/ac_clusterless_decoding
edeno/mc_decoding
edeno/atom
:atom: The hackable text editor
edeno/dynamax
State Space Models library in JAX
edeno/gl-spyglass-tables
Gillespie Lab Spyglass tables
edeno/hdmf
The Hierarchical Data Modeling Framework
edeno/IOHMM
Input Output Hidden Markov Model (IOHMM) in Python
edeno/jax
Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more
edeno/jg_clusterless_decoding
edeno/latent_dynamics_workshop
Exercises and examples for the latent dynamics workshop
edeno/movement
Python tools for analysing body movements across space and time
edeno/ndx-xarray
An NWB extension to store generic xarray datasets in an NWB file
edeno/pynwb
A Python API for working with Neurodata stored in the NWB Format
edeno/simulate_probe_marks
edeno/sleep_analysis
edeno/spyglass
Neuroscience data pipeline for reproducible research built by Loren Frank Lab at UCSF
edeno/spyglass-project-template
edeno/stumpy
STUMPY is a powerful and scalable Python library for modern time series analysis
edeno/test_electron
edeno/test_hmm
edeno/tk_decoding
edeno/tn_decoding
edeno/track-image-processing