Pinned Repositories
AutomationAgent
BDQC
Big Data Quality Control
Community-Notebooks
Repository for Jupyter Notebooks
containers
Bioinformatics containers
FragPipe
A cross-platform Graphical User Interface (GUI) for running MSFragger and Philosopher - powered pipeline for comprehensive analysis of shotgun proteomics data
Lorikeet
Lorikeet is a JQuery plugin to view MS/MS spectra annotated with fragment ions.
mzML
Repository for mzML and the corresponding examples
NCATS-ReasonerStdAPI
NCATS Biomedical Translator Reasoners Standard API
OBOFoundry.github.io
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
proxi-schemas
ProXI: Schema definitions for the Proteomics eXpression Interface
edeutsch's Repositories
edeutsch/AutomationAgent
edeutsch/BDQC
Big Data Quality Control
edeutsch/Community-Notebooks
Repository for Jupyter Notebooks
edeutsch/containers
Bioinformatics containers
edeutsch/FragPipe
A cross-platform Graphical User Interface (GUI) for running MSFragger and Philosopher - powered pipeline for comprehensive analysis of shotgun proteomics data
edeutsch/Lorikeet
Lorikeet is a JQuery plugin to view MS/MS spectra annotated with fragment ions.
edeutsch/mzML
Repository for mzML and the corresponding examples
edeutsch/NCATS-ReasonerStdAPI
NCATS Biomedical Translator Reasoners Standard API
edeutsch/OBOFoundry.github.io
Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
edeutsch/proxi-schemas
ProXI: Schema definitions for the Proteomics eXpression Interface
edeutsch/psi-ms-CV
HUPO-PSI mass spectrometry CV
edeutsch/purl.obolibrary.org
A system for managing OBO PURLs
edeutsch/qscripts
Collection of cluster queing scripts
edeutsch/Relay
Autonomous relay system for NCATS Biomedical Data Translator
edeutsch/RunAssessor
Assesses an MS Run mzML file for important information de novo
edeutsch/SpecLibIndexing
Some code to create spectral library indexes for fast query and access
edeutsch/specpride
Analysis of different consensus spectrum construction methods
edeutsch/SpectralLibraries
Some code experimenting with spectral libraries
edeutsch/tppaws
edeutsch/USI