Pinned Repositories
.doom.d
My private module for Doom Emacs
altair-upset
Create interactive UpSet plots using Altair
dotfiles
For keeping all my Dotfiles update to date
emacs-doom-community-themes
An opinionated pack of modern color-themes, from the doom-emacs community
emacs-jest
A package to run jest inside emacs
guix
A package and module for using GNU Guix on Nix(OS). Kinda more a code dump than for actual use.
Mastodon-Bioinformatics
Most simple webapp to bulk follow bioinformatics accounts on Mastodon.
MoneroFaucet
nextflow-mode
Emacs major mode for Nextflow
nascent
Nascent Transcription Processing Pipeline
edmundmiller's Repositories
edmundmiller/dotfiles
For keeping all my Dotfiles update to date
edmundmiller/.doom.d
My private module for Doom Emacs
edmundmiller/nextflow-mode
Emacs major mode for Nextflow
edmundmiller/Mastodon-Bioinformatics
Most simple webapp to bulk follow bioinformatics accounts on Mastodon.
edmundmiller/altair-upset
Create interactive UpSet plots using Altair
edmundmiller/edmundmiller.dev
My personal site
edmundmiller/duckdb-nf
edmundmiller/tree-sitter-nextflow
edmundmiller/crossref-nf
edmundmiller/mcp-server-duckdb
A Model Context Protocol (MCP) server implementation for DuckDB, providing database interaction capabilities
edmundmiller/visidata-bioinformatics
Visidata Plugins for Bioinformatics file formats
edmundmiller/wave-showcase
Examples showing how to configure Nextflow to run with Wave containers provisioning service
edmundmiller/adopt-a-code
edmundmiller/altair
Declarative visualization library for Python
edmundmiller/browser-extension
The browser extension for gitpod.io. Works with Chrome and Firefox.
edmundmiller/db-benchmark
reproducible benchmark of database-like ops
edmundmiller/differentialabundance
Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq
edmundmiller/mason-registry
Core registry for mason.nvim.
edmundmiller/mre-itrerative-scripts
edmundmiller/nextflow
A DSL for data-driven computational pipelines
edmundmiller/nf-core-arm-discovery
edmundmiller/nf-notify
edmundmiller/periodic_legislation
edmundmiller/quickrelease
edmundmiller/sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
edmundmiller/seqera-kit
Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)
edmundmiller/shell-plugins
Seamless authentication for every tool in your terminal.
edmundmiller/tesseract
A tool for creating resource prediction models for scientific workflows
edmundmiller/upset-altair-notebook
Jupyter Notebooks and other code for Altair-based Interactive UpSet Plots
edmundmiller/upset-app