egustavsson

Researcher with an interest in genomic and transcriptomic analyses of neurological disease

UCLLondon, United Kingdom

Pinned Repositories

GBA_GBAP1_manuscript
Code for the GBA manuscript
Language:R2 1 00
long-read_SV_calling
Snakemake pipelne to call structural variants from long-read DNA sequencing
2 1 01
pipeline-isoforms-ONT-stringtie
Analysis of ONT long-read RNA seq using StringTie2
0 1 00
pipeline-isoforms-ONT-TALON
Analysis of ONT long-read RNA seq using TALON
0 0 01
pipeline-ref-isoforms-ONT
Language:Python0 1 00
runExomeDepth
This repo contains a dockerised tool to call CNVs using ExomeDepth
Language:Python10
SNCA_manuscript
Language:R0 1 00
TX2P
TX2P - Transcript to protein
Language:R1 1 20
ONT_DNA_pipeline
0 1 00

egustavsson's Repositories

egustavsson/GBA_GBAP1_manuscript
Code for the GBA manuscript
Language:R2 1 00
egustavsson/long-read_SV_calling
Snakemake pipelne to call structural variants from long-read DNA sequencing
2 1 01
egustavsson/runExomeDepth
This repo contains a dockerised tool to call CNVs using ExomeDepth
Language:Python10
egustavsson/pipeline-isoforms-ONT-stringtie
Analysis of ONT long-read RNA seq using StringTie2
0 1 00
egustavsson/pipeline-isoforms-ONT-TALON
Analysis of ONT long-read RNA seq using TALON
0 0 01
egustavsson/pipeline-ref-isoforms-ONT
Language:Python0 1 00
egustavsson/SNCA_manuscript
Language:R0 1 00