eipVCCRI

Sydney, Australia

Pinned Repositories

ABACBSAbsSS
Conference abstract submission and review web application
Language:Python1 2 12
ABACBSAbsSS-2024
Conference abstract submission and review web application - update for use in 2024
Language:Python0 0 00
hap.py
Haplotype VCF comparison tools
Language:C++0 0 00
MitoSeek
Seeking information like heteroplasmy, structure variants, etc. on Mitochondrial genome from next generation sequencing
Language:Perl0 0 00
SVPV
Structural Variant Prediction Viewer
Language:Python0 0 00
dv-trio
dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCFs) created by DeepVariants are then co_called together using GATK[2]. The resultant trio VCF is then post-processing with FamSeq[3] to eliminate mendelian errors.
Language:Shell9 8 41
MetaDenovo
MetaDenovo : An automated framework to detect de novo mutations from whole genome trio data using cloud computing technology.
Language:WDL0 7 00
VPOT
VPOT - Variant Prioritisation Ordering Tool. VPOT is a Python tool written to allow prioritisation of variants in ANNOVAR annotated VCF files.
Language:Python10 6 53

eipVCCRI/ABACBSAbsSS-2024
Conference abstract submission and review web application - update for use in 2024
Language:Python0 0 00
eipVCCRI/hap.py
Haplotype VCF comparison tools
Language:C++0 0 00
eipVCCRI/MitoSeek
Seeking information like heteroplasmy, structure variants, etc. on Mitochondrial genome from next generation sequencing
Language:Perl0 0 00
eipVCCRI/SVPV
Structural Variant Prediction Viewer
Language:Python0 0 00