Pinned Repositories
CellMembrane
An R package with wrappers and pipelines for single cell RNA-seq analysis
ShinySDA
Shiny tool to load and browse SDA objects
17-testis-single-cell-R-github-data
17 testis single cell R analysis processing
CellNet
CellNet: network biology applied to stem cell engineering
cellrouter
Reconstruction of complex single-cell trajectories using CellRouter
eisascience.github.io
Eisa Mahyari's GitHub Page
HISTA
Human Infertility Single-cell Testis Atlas
scCustFx
Custom FX used in single-cell analysis and exploration.
ScientificOSX
Setting up a new mac OSX
ShinySDA
Shiny tool to load and browse SDA objects
eisascience's Repositories
eisascience/ScientificOSX
Setting up a new mac OSX
eisascience/eisascience.github.io
Eisa Mahyari's GitHub Page
eisascience/HISTA
Human Infertility Single-cell Testis Atlas
eisascience/17-testis-single-cell-R-github-data
17 testis single cell R analysis processing
eisascience/cellrouter
Reconstruction of complex single-cell trajectories using CellRouter
eisascience/scCustFx
Custom FX used in single-cell analysis and exploration.
eisascience/ShinySDA
Shiny tool to load and browse SDA objects
eisascience/CellularPhenotypes
A comprehensive collection of transcriptomic (and other) markers for identification of individual cells (phenotype, state, etc) at various scopes
eisascience/docker-data-science
Set up an automated data science environment using Docker
eisascience/Docker_DataScience
Rocker/verse based docker image + Goodies
eisascience/Dockerfiles
eisascience/MCDS
MCDS = Multimodal Classsification Dataset Simulator
eisascience/monet
Monet: An open-source Python package for analyzing and integrating scRNA-Seq data using PCA-based latent spaces
eisascience/MoSpaTA
Mouse Spatial omics Testis Atlas
eisascience/NormalizationMethods
An accumulation of normalization methods
eisascience/PViST
Platform for exploration, analysis, & Visualization of Spatial Transcriptomes (PViST). A shiny app package.
eisascience/PythonProj
eisascience/RheSpaTA
Rhesus Spatialomic Testis Atlas
eisascience/rnaseq
eisascience/RTLbase
The R Transfer Learning (RTL) Classification Framework - Baseline Implementation v1.0.0
eisascience/SapSpaTA
eisascience/scRNASeq_old
Tools and functions for conducting scRNASeq in my pipelines
eisascience/scRNASeqEisa
eisascience/Shapiro_Haigwood_SHIV
eisascience/shiny
eisascience/shiny-examples
eisascience/ShinyMultiSDA
ShinyMultiSDA (Shi-mu-sda) is a multi SDA integration Shiny tool
eisascience/Stereopy
A toolkit of spatial transcriptomic analysis.
eisascience/Wong-Gold-Lewinsohn
TCR Enrichment Analysis (TEA) Webtool
eisascience/XchromCN_Docker
A Docker pipeline to call X chromosome copy number on BAM files