ekatrukha/BigTrace

FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets

BigTrace

FIJI plugin for tracing and analysis of curvilinear structures in large (and small) volumetric microscopy datasets using BigVolumeViewer for visualization (actually bvv-playground is used).

For full description and manual refer to Wiki page.

The plugin is scriptable using ImageJ macros.

Main topics:

• How to install plugin
• How to use plugin
• How to cite plugin?

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Developed in Cell Biology group of Utrecht University.
E-mail for any questions or tag @ekatrukha at image.sc forum.