eLife Sciences
eLife is a 'not for profit' inspired by research funders and led by scientists, to help accelerate discovery by operating a platform for research communication
Cambridge, UK
Pinned Repositories
avian-immunity
Scripts for studying the evolution of immune genes across birds.
CellsMD3D
Ciliberti_Elife2018_RealTimeReplay
HBPcollab
hetionet
Hetionet: an integrative network of disease
immuneTopography
Analyze topography of tumor-infiltrating immune cells in histological images (QuPath/Matlab)
InferentialMistakes
ProteinMotifRBM
Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox
seqNMF
An algorithm for unsupervised discovery of sequential structure
torord
Repository for the cardiac model ToR-ORd
eLife Sciences's Repositories
elifesciences-publications/Ngo_et_al_eLife2020
Matlab code for data analyses published in Ngo et al., eLife 2020.
elifesciences-publications/stable-task-information
Source code files for Rule, Loback et al. 2019
elifesciences-publications/Worm-Motor-Sequence-Generation
elifesciences-publications/affinity_maturation
This repository contains the code for the simulations and figures of the paper "Quantitative modeling of the effect of antigen dosage on the distribution of B-cell affinities in maturating germinal centers", by Marco Molari, Klaus Eyer, Jean Baudry, Simona Cocco, and Rémi Monasson.
elifesciences-publications/article-private-public
Data and code supporting: Bang, Ershadmanesh, Nili & Fleming, Private-public mappings in human prefrontal cortex, bioRxiv (2020).
elifesciences-publications/Chloroquine-concentration-fatality
Pooled analysis of mortality and QRS widening in chloroquine self-poisoning patients and healthy volunteers: estimating safety of currently trialled chloroquine regimens
elifesciences-publications/CiliaQ
An ImageJ plugin to quantify ciliary shape, length, and fluorescence.
elifesciences-publications/ClustersCOVID19
Repo for description of Singapore and Tianjin COVID19 clusters, and related estimation
elifesciences-publications/code-Sanzeni-inhibition-stabilization-cortex
Code for Sanzeni et al. "Inhibition stabilization is a widespread property of cortical networks"
elifesciences-publications/connectivityelife
elifesciences-publications/DopamineAndFear
Code to analyze data from Cai et al., eLife 2020
elifesciences-publications/droplet
matlab code for microcolony droplets
elifesciences-publications/DSTRF
Dynamic Spectrotemporal Receptive Field Analysis
elifesciences-publications/EEG_proxy_from_network_point_neurons
EEG proxy from networks of point neurons
elifesciences-publications/ei_hurst
elifesciences-publications/eLife2020-recurrents-stabilize
Code for figures in Bolding et al. 2020 (eLife)
elifesciences-publications/ExogEndogEarProject
Exogenous and endogenous attention parts of the ear project
elifesciences-publications/Eyeblink-Conditioning
Storage of eyeblink conditioning LabVIEW code
elifesciences-publications/FluAImprinting
Data and code for Arevalo et al., 2019
elifesciences-publications/FlySound
Fly sounds
elifesciences-publications/HGT_Genes_And_SGEs
Source code for "Slightly beneficial genes are retained by evolving Horizontal Gene Transfer despite selfish elements"
elifesciences-publications/InsectNavigationToolkitModelling
Modelling the insect navigation toolkit
elifesciences-publications/LabelSelectedFramesForDLC
Simple script to label imgXXX.png images for training sets for DLC
elifesciences-publications/Lapsansky_Zatz_Tobalske_eLife_2020
IN REVIEW: A repository for the data used in the paper Lapsansky et al. (2020) "Alcids ‘fly’ at efficient Strouhal numbers in both air and water but vary stroke velocity and angle"
elifesciences-publications/lung_neonatal_immune
Repo for Neonatal lung immune cell paper
elifesciences-publications/smfish_pipeline
Pipeline for Analysis of smFISH Images
elifesciences-publications/spikeDetection
Interactively detect spikes in D mel data
elifesciences-publications/stdpopsim
A library of standard population genetic models
elifesciences-publications/string_pulling_mouse_matlab
"String Pulling Behavioral Analytics" for analysis of video data of mice engaged in string-pulling
elifesciences-publications/Zebrafish-stripe-model
Model for zebrafish pattern formation. Files relating to paper "A quantitative modelling approach to zebrafish pigment pattern formation" eLife 2020 (accepted) authors of paper: Jennifer Owen, Robert Kelsh, Christian Yates