Gardnerella-Interactions

This repository is still a work in progress

MEMOTE Scores for Reconstructions

85%: Lactobacillus iners DSM 13335 (525328.13)
83%: Aerococcus christensenii strain CCUG28831 (87541.3)
84%: Prevotella bivia DSM 20514 (868129.3)
85%: Prevotella timonensis 4401737 = DSM 22865 = JCM 15640 (1122992.3)
84%: Fannyhessea vaginae strain FDAARGOS_934 strain Not applicable (82135.84)
85%: Prevotella amnii DSM 23384 (1122979.3)
84%: Prevotella tannerae ATCC 51259 (626522.3)
84%: Prevotella buccalis ATCC 35310 (679190.3)
85%: Gardnerella vaginalis HMP9231 (1009464.3)
85%: Gardnerella vaginalis JCP7275 (1261057.4)
85%: Gardnerella vaginalis JCP7276 (1261058.4)
85%: Gardnerella vaginalis JCP7659 (1261059.4)
84%: Gardnerella vaginalis JCP7672 (1261060.4)
84%: Gardnerella vaginalis JCP7719 (1261061.4)
85%: Gardnerella vaginalis JCP8017A (1261062.4)
85%: Gardnerella vaginalis JCP8017B (1261063.4)
85%: Gardnerella vaginalis JCP8066 (1261064.4)
85%: Gardnerella vaginalis JCP8070 (1261065.4)
84%: Gardnerella vaginalis JCP8108 (1261066.4)
85%: Gardnerella vaginalis JCP8151A (1261067.4)
85%: Gardnerella vaginalis JCP8151B (1261068.4)
85%: Gardnerella vaginalis JCP8481A (1261069.4)
85%: Gardnerella vaginalis JCP8481B (1261070.4)
85%: Gardnerella vaginalis JCP8522 (1261071.4)
85%: Gardnerella sp. 30-4 (1840518.6)
85%: Gardnerella sp. 26-12 (1841133.4)
85%: Gardnerella sp. DNF01162 (1973155.3)
85%: Gardnerella sp. KA00735 (1973156.3)
85%: Bifidobacteriaceae bacterium NR017 (2021361.5)
85%: Bifidobacteriaceae bacterium N170 (2021364.4)
85%: Bifidobacteriaceae bacterium GH005 (2026092.4)
85%: Bifidobacteriaceae bacterium NR016 (2026093.4)
84%: Bifidobacteriaceae bacterium VN002 (2026097.4)
85%: Bifidobacteriaceae bacterium NR026 (2026098.4)
85%: Bifidobacteriaceae bacterium NR047 (2026100.4)
85%: Bifidobacteriaceae bacterium NR026 (2026100.4)
84%: Bifidobacteriaceae bacterium NR044 (2676752.3)
84%: Bifidobacteriaceae bacterium NR043 (2676753.3)
85%: Bifidobacteriaceae bacterium NR002 (2676754.3)
85%: Gardnerella vaginalis strain CMW7778B (2702.101)
85%: Gardnerella vaginalis strain 23-12 (2702.103)
84%: Gardnerella vaginalis strain 18-4 (2702.104)
84%: Gardnerella vaginalis strain DSM 4944 18-4 (2702.105)
85%: Gardnerella vaginalis strain ATCC 49145 (2702.107)
85%: Gardnerella vaginalis strain GV37 (2702.108)
85%: Gardnerella vaginalis strain UMB1686 (2702.147)
85%: Gardnerella vaginalis strain UMB1642 (2702.148)
85%: Gardnerella vaginalis strain UMB0768 (2702.149)
85%: Gardnerella vaginalis strain UMB0264 (2702.151)
85%: Gardnerella vaginalis strain DNF01149 (2702.152)
85%: Gardnerella vaginalis strain KA00225 (2702.153)
85%: Gardnerella vaginalis strain ATCC 49145 (2702.154)
85%: Gardnerella vaginalis strain UGent 06.41 (2702.157)
85%: Gardnerella vaginalis strain W11 (2702.164)
85%: Gardnerella vaginalis strain N101 (2702.165)
85%: Gardnerella vaginalis strain N153 (2702.166)
84%: Gardnerella vaginalis strain N95 (2702.167)
85%: Gardnerella vaginalis strain UGent 18.01 (2702.168)
85%: Gardnerella vaginalis strain UGent 09.48 (2702.171)
84%: Gardnerella vaginalis strain UGent 09.07 (2702.172)
85%: Gardnerella vaginalis strain GS 9838-1 (2702.173)
85%: Gardnerella vaginalis strain GS 10234 (2702.174)
85%: Gardnerella vaginalis strain GH015 (2702.176)
84%: Gardnerella vaginalis strain N160 (2702.177)
85%: Gardnerella vaginalis strain N165 (2702.178)
85%: Gardnerella vaginalis strain N72 (2702.179)
85%: Gardnerella vaginalis strain NR010 (2702.181)
84%: Gardnerella vaginalis strain GH007 (2702.185)
85%: Gardnerella vaginalis strain FDAARGOS_568 (2702.191)
85%: Gardnerella vaginalis strain NCTC10287 (2702.194)
85%: Gardnerella vaginalis strain 14018c (2702.269)
85%: Gardnerella vaginalis strain MGYG-HGUT-00021 (2702.299)
85%: Gardnerella vaginalis strain UMB0202 (2702.327)
85%: Gardnerella vaginalis strain UMB0540 (2702.328)
85%: Gardnerella vaginalis strain UMB0736 (2702.329)
85%: Gardnerella vaginalis strain UMB0358 (2702.331)
85%: Gardnerella vaginalis strain UMB0742 (2702.332)
85%: Gardnerella vaginalis strain UMB0769 (2702.333)
85%: Gardnerella vaginalis strain UMB0662 (2702.334)
85%: Gardnerella vaginalis strain UMB1489 (2702.335)
85%: Gardnerella vaginalis strain UMB1698 (2702.336)
85%: Gardnerella vaginalis strain UMB0558 (2702.337)
85%: Gardnerella vaginalis strain UMB1350 (2702.338)
84%: Gardnerella vaginalis strain 06-12-0010 (2702.343)
85%: Gardnerella vaginalis strain SRR341673-bin.9 (2702.348)
85%: Gardnerella vaginalis KC2 (2702.422)
85%: Gardnerella vaginalis KC4 (2702.423)
84%: Gardnerella vaginalis KC1 (2702.424)
85%: Gardnerella vaginalis KC3 (2702.425)
85%: Gardnerella vaginalis JNFY13 (2702.434)
85%: Gardnerella vaginalis JNFY14 (2702.435)
85%: Gardnerella vaginalis JNFY17 (2702.436)
85%: Gardnerella vaginalis JNFY28 (2702.437)
85%: Gardnerella vaginalis JNFY11 (2702.439)
85%: Gardnerella vaginalis JNFY1 (2702.441)
85%: Gardnerella vaginalis p4thOJr353_bin.42.MAG (2702.442)
85%: Gardnerella vaginalis MihHfjTX5f_bin.2.MAG (2702.445)
85%: Gardnerella vaginalis Y0hIShCkoH_bin.2.MAG (2702.446)
85%: Gardnerella vaginalis ERR9538571_bin.1_metaWRAP_v1.3_MAG (2702.451)
85%: Gardnerella vaginalis ERR9538571_bin.1_metaWRAP_v1.3_MAG (2702.452)
85%: Gardnerella vaginalis ERR9535635_bin.9_metaWRAP_v1.3_MAG (2702.453)
85%: Gardnerella vaginalis ERR9538619_bin.3_metaWRAP_v1.3_MAG (2702.454)
84%: Gardnerella vaginalis ERR9538868_bin.1_metaWRAP_v1.3_MAG (2702.455)
85%: Gardnerella vaginalis SRR12830914_bin.5_metaWRAP_v1.3_MAG (2702.456)
85%: Gardnerella vaginalis SRR12830913_bin.3_metaWRAP_v1.3_MAG (2702.457)
85%: Gardnerella vaginalis SRR12830915_bin.3_metaWRAP_v1.3_MAG (2702.458)
85%: Gardnerella vaginalis SRR12830910_bin.18_metaWRAP_v1.3_MAG (2702.459)
85%: Gardnerella vaginalis SRR12830929_bin.11_metaWRAP_v1.3_MAG (2702.461)
85%: Gardnerella vaginalis SRR12830914_bin.11_metaWRAP_v1.3_MAG (2702.462)
85%: Gardnerella vaginalis SRR12830916_bin.9_metaWRAP_v1.3_MAG (2702.463)
84%: Gardnerella vaginalis SRR12830927_bin.6_metaWRAP_v1.3_MAG (2702.464)
84%: Gardnerella vaginalis SRR12830912_bin.5_metaWRAP_v1.3_MAG (2702.465)
84%: Gardnerella vaginalis SRR12820919_bin.3_metaWRAP_v1.3_MAG (2702.466)
84%: Gardnerella vaginalis SRR12830911_bin.3_metaWRAP_v1.3_MAG (2702.467)
84%: Gardnerella vaginlais SRR16916882_bin.7_metaWRAP_v1.3_MAG (2702.468)
85%: Gardnerella vaginalis SRR16916874_bin.3_metaWRAP_v1.3_MAG (2702.469)
85%: Gardnerella vaginalis SRR16916863_bin.7_metaWRAP_v1.3_MAG (2702.471)
85%: Gardnerella vaginalis SRR16916860_bin.11_metaWRAP_v1.3_MAG (2702.472)
84%: Gardnerella vaginalis SRR16916857_bin.4_metaWRAP_v1.3_MAG (2702.473)
84%: Gardnerella vaginalis SRR16916860_bin.30_metaWRAP_v1.3_MAG (2702.474)
85%: Gardnerella vaginalis SRR16916866_bin.1_metaWRAP_v1.3_MAG (2702.475)
85%: Gardnerella vaginalis SRR16916874_bin.23_metaWRAP_v1.3_MAG (2702.476)
85%: Gardnerella vaginalis SRR16916889_bin.2_metaWRAP_v1.3_MAG (2702.477)
85%: Gardnerella vaginalis SRR16916887_bin.2_metaWRAP_v1.3_MAG (2702.478)
84%: Gardnerella vaginalis ERR4705259_bin.2_metaWRAP_v1.3_MAG (2702.479)
85%: Gardnerella vaginalis SRR11742806_bin.4_metaWRAP_v1.3_MAG (2702.481)
85%: Gardnerella vaginalis ERR4705294_bin.10_metaWRAP_v1.3_MAG (2702.482)
85%: Gardnerella vaginalis MihHfjTX5f_bin.2.MAG (2702.483)
85%: Gardnerella vaginalis Y0hIShCkoH_bin.2.MAG (2702.484)
85%: Gardnerella vaginalis SRR11749277_bin.1_metaWRAP_v1.3_MAG (2702.487)
85%: Gardnerella vaginalis SRR10258575_bin.3_metaWRAP_v1.3_MAG (2702.488)
85%: Gardnerella vaginalis SRR10258543_bin.3_metaWRAP_v1.3_MAG (2702.489)
85%: Gardnerella vaginalis SRR10258553_bin.16_metaWRAP_v1.3_MAG (2702.491)
84%: Gardnerella vaginalis SRR10258560_bin.3_metaWRAP_v1.3_MAG (2702.492)
85%: Gardnerella vaginalis SRR10258560_bin.2_metaWRAP_v1.3_MAG (2702.493)
86%: Gardnerella vaginalis SRR10258547_bin.2_metaWRAP_v1.3_MAG (2702.494)
85%: Gardnerella vaginalis SRR17635654_bin.9_metaWRAP_v1.3_MAG (2702.495)
83%: Gardnerella vaginalis SRR17635488_bin.1_metaWRAP_v1.3_MAG (2702.496)
85%: Gardnerella vaginalis SRR17635681_bin.4_metaWRAP_v1.3_MAG (2702.497)
84%: Gardnerella vaginalis SRR17635820_bin.4_metaWRAP_v1.3_MAG (2702.498)
85%: Gardnerella vaginalis SRR17635574_bin.1_metaWRAP_v1.3_MAG (2702.499)
84%: Gardnerella vaginalis SRR17635502_bin.2_metaWRAP_v1.3_MAG (2702.501)
85%: Gardnerella vaginalis SRR17635467_bin.5_metaWRAP_v1.3_MAG (2702.502)
84%: Gardnerella vaginalis SRR17635698_bin.13_metaWRAP_v1.3_MAG (2702.503)
84%: Gardnerella vaginalis SRR17635796_bin.2_metaWRAP_v1.3_MAG (2702.504)
85%: Gardnerella vaginalis SRR17635526_bin.6_metaWRAP_v1.3_MAG (2702.505)
85%: Gardnerella vaginalis SRR17635557_bin.1_metaWRAP_v1.3_MAG (2702.506)
84%: Gardnerella vaginalis SRR17635626_bin.5_metaWRAP_v1.3_MAG (2702.507)
85%: Gardnerella vaginalis SRR17635487_bin.2_metaWRAP_v1.3_MAG (2702.509)
85%: Gardnerella vaginalis SRR17635654_bin.4_metaWRAP_v1.3_MAG (2702.511)
85%: Gardnerella vaginalis SRR17635627_bin.1_metaWRAP_v1.3_MAG (2702.512)
84%: Gardnerella vaginalis SRR17635698_bin.6_metaWRAP_v1.3_MAG (2702.513)
85%: Gardnerella vaginalis UMB0386 (2702.514)
85%: Gardnerella vaginalis UMB0912 (2702.516)
85%: Gardnerella vaginalis UMB0913 (2702.517)
85%: Gardnerella vaginalis UMB0061 (2702.518)
85%: Gardnerella vaginalis UMB0833 (2702.519)
85%: Gardnerella vaginalis UMB0830 (2702.521)
84%: Gardnerella vaginalis UMB0770 (2702.522)
85%: Gardnerella vaginalis UMB0298 (2702.523)
84%: Gardnerella vaginalis UMB0032A (2702.524)
85%: Gardnerella vaginalis UMB0032B (2702.525)
85%: Gardnerella vaginalis UMB0628 (2702.526)
85%: Gardnerella vaginalis UMB0233 (2702.527)
85%: Gardnerella vaginalis UMB0388 (2702.528)
85%: Gardnerella vaginalis 3549624 (2702.92)
85%: Gardnerella vaginalis 1036_GVAG (2702.93)
85%: Gardnerella vaginalis 350_GVAG (2702.94)
85%: Gardnerella vaginalis 476_GVAG (2702.95)
85%: Gardnerella vaginalis 842_GVAG (2702.96)
85%: Gardnerella vaginalis 14019_MetR (2702.97)
84%: Gardnerella vaginalis GED7275B (2702.98)
85%: Gardnerella vaginalis GED7760B (2702.99)
85%: Gardnerella vaginalis Marseille-Q2328 (2759694.3)
85%: Gardnerella vaginalis JNFY15 (2792977.4)
85%: Gardnerella vaginalis JNFY3 (2792979.8)
85%: Gardnerella vaginalis UMB0411 (2792979.9)
84%: Gardnerella vaginalis SRR17635668_bin.2_metaWRAP_v2.3_MAG (293424.12)
86%: Gardnerella vaginalis SRR17635774_bin.4_metaWRAP_v1.3_MAG (293424.14)
85%: Gardnerella vaginalis SRR17635697_bin.7_metaWRAP_v1.3_MAG (293424.15)
85%: Gardnerella vaginalis SRR17635656_bin.2_metaWRAP_v1.3_MAG (293424.16)
84%: Gardnerella vaginalis SRR17635740_bin.9_metaWRAP_v1.3_MAG (293424.17)
85%: Gardnerella vaginalis SRR17635774_bin.5_metaWRAP_v1.3_MAG (293424.19)
85%: Gardnerella vaginalis SRR15429248_bin.3_metawrap_v1.3_MAG (293424.21)
85%: Gardnerella vaginalis MGYG-HGUT-01287 (293424.3)
85%: Gardnerella vaginalis AZGAGYyCwe_bin.11.MAG (293424.4)
85%: Gardnerella vaginalis ERR9530663_bin.t_metaWRAP_v1.3_MAG (293424.5)
85%: Gardnerella vaginalis SRR16916856_bin.5_metaWRAP_v1.3_MAG (293424.6)
84%: Gardnerella vaginalis ERR47005252_bin.16_metaWRAP_v1.3_MAG (293424.7)
84%: Gardnerella vaginalis SRR11749282_bin.10_metaWRAP_v1.3_MAG (293424.8)
84%: Gardnerella vaginalis SRR11749285_bin.10_metaWRAP_v1.3_MAG (293424.9)
84%: Gardnerella vaginalis ATCC14019 (525284.18)
85%: Gardnerella vaginalis 409-05 (553190.4)
85%: Gardnerella vaginalis JCM 11026 (585528.11)
84%: Gardnerella vaginalis ATCC 14018 (585528.15)
85%: Gardnerella vaginalis ATCC 14018 (585528.19)
84%: Gardnerella vaginalis ATCC 14018 (585528.6)
85%: Gardnerella vaginalis AMD (682147.3)
85%: Gardnerella vaginalis 5-1 (682148.3)
85%: Gardnerella vaginalis 284V (698950.3)
85%: Gardnerella vaginalis 75712 (698951.3)
84%: Gardnerella vaginalis 0288E (698952.3)
85%: Gardnerella vaginalis 6420B (698954.3)
85%: Gardnerella vaginalis 55152 (698955.3)
85%: Gardnerella vaginalis 1400E (698956.3)
84%: Gardnerella vaginalis 1500E (698957.3)
84%: Gardnerella vaginalis 00703Bmash (698958.3)
85%: Gardnerella vaginalis 00703C2mash (698959.3)
84%: Gardnerella vaginalis 00703Dmash (698960.3)
84%: Gardnerella vaginalis 6119V5 (698961.3)
85%: Gardnerella vaginalis 315-A (879307.3)
85%: Gardnerella vaginalis 101 (904144.3)
85%: Gardnerella vaginalis 41V (907262.3)