engineer-pat
PhD Candidate, Nanoscience and Microsystems Engineering at the University of New Mexico. Background in chemical engineering, pharma R&D and bioinformatics.
Pinned Repositories
arduino-kafka-streamlit
chat-streamlit
for my own use, sporadic use of GPT-4
csid-prepub
csid_grant
deepchemML
excelsior
The repo from which my website is built; employs next.js framework, Mantine component package and React
funWithStrings
Acquire text via web scraping, check for palindromes and anagrams on web pages
gnomad-proteinfold-vina
gnomAD seq to protein 3D structure prediction pipeline to docking with AutoDock Vina
huggingface_mirror
strain_selection
Just importing this here, actually hosted on huggingface
engineer-pat's Repositories
engineer-pat/huggingface_mirror
engineer-pat/strain_selection
Just importing this here, actually hosted on huggingface
engineer-pat/arduino-kafka-streamlit
engineer-pat/chat-streamlit
for my own use, sporadic use of GPT-4
engineer-pat/csid-prepub
engineer-pat/csid_grant
engineer-pat/deepchemML
engineer-pat/excelsior
The repo from which my website is built; employs next.js framework, Mantine component package and React
engineer-pat/funWithStrings
Acquire text via web scraping, check for palindromes and anagrams on web pages
engineer-pat/gnomad-proteinfold-vina
gnomAD seq to protein 3D structure prediction pipeline to docking with AutoDock Vina
engineer-pat/heme-binding
Pat's Master's thesis project!
engineer-pat/heme_docking
Assessing the distribution of binding affinities/energies of HEM in hemoprotein pockets. Follow up to thesis work.
engineer-pat/iris_mlflow
engineer-pat/mama
engineer-pat/ML_rdkit
ML models to predict protein class target for small molecules, based off smiles/rdkit/deepchm data
engineer-pat/ML_rnaseq
engineer-pat/presentations-pat101
engineer-pat/rnaseq_her2
Analysis of RNA-Seq/RSEM Data for HER2/ERRB2
engineer-pat/SI-variant-analysis
engineer-pat/streamlit_asst
AI Assistant using Streamlit and the OpenAI Assistant API