epaaso/sc-luca-explore

Issues

• Check scLUCA annotation with normal adjacent tissue

  #24 opened 2 months ago
  1

• Calculate network metrics

  #23 opened 3 months ago
  1

• How to integrate a new dataset?

  #22 opened 3 months ago
  4

• Bootstrap the ARACNE algorithm

  #21 opened 3 months ago
  1

• Use pseudotime to observe some plasticity in our cells

  #20 opened 3 months ago
  0

• Chose some unsupervised clusters for Tumor cells

  #19 opened 3 months ago
  0

• Heatmap of gene signatures for cellular types

  #18 opened 3 months ago
  2

• Flowcharts of analysis with inputs and outputs

  #17 opened 8 months ago
  1

• How will we label cancer cells?

  #16 opened 9 months ago
  1

• Laughney has very small samples

  #15 opened a year ago
  0

• Create coabundance graph

  #14 opened 10 months ago
  2

• Bug Saving `adata_query` to h5ad

  #11 opened a year ago
  1

• NVM craches suddenly

  #10 opened a year ago
  4

• Annotations on the nature of the datasets

  #9 opened a year ago
  9

• Run until Cluster with Annot on all datasets

  #8 opened a year ago
  0

• Run Chen dataset until PCA or UMAP with annot

  #7 opened a year ago
  0

• Hijack singularity container

  #6 opened a year ago
  0

• Finish table of chem and align

  #5 opened 3 months ago
  3

• Parametrize annotation all datas

  #4 opened a year ago
  4

• OpenBLAS error with knn_transfer

  #3 opened a year ago
  7

• Update jlab

  #2 opened 9 months ago
  3

• Ideal hyperparams scArches

  #1 opened a year ago
  4