epaule

ASGCambridge, UK

Pinned Repositories

BGA24
training material for the BGA2024 course Samples to Genomes
Language:AMPL30
BRAKER
BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET and AUGUSTUS in novel eukaryotic genomes
Language:Perl10
btk_sequences_to_remove
1 5 60
genblastg_patch
patched version of genblastg v.139 of the Jack Chen lab
Language:C++3 1 11
homebrew
The missing package manager for OS X.
Language:Ruby1 2 00
modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
Language:Nextflow10
PretextMap
Paired REad TEXTure Mapper. Converts SAM formatted read pairs into genome contact maps.
Language:C1 0 10
PretextView
OpenGL Powered Pretext Contact Map Viewer
Language:C10
Rapid-curation-2.0
TPF-less rapid curation of genomes
Language:Python1 0 00
S2G-manual-curation
Samples 2 Genome (ASG): Introduction to Manual Curation of ASG samples - HiC and JBrowse
Language:Shell10

epaule's Repositories

epaule/genblastg_patch
patched version of genblastg v.139 of the Jack Chen lab
Language:C++3 1 11
epaule/homebrew
The missing package manager for OS X.
Language:Ruby1 2 00
epaule/cactus2hal
Convert progressive cactus database into a hal file
Language:C++1 0
epaule/nameserver2
nameserver version 2
Language:Perl
epaule/ruby-ensembl-api
A ruby API to the Ensembl database
Language:Ruby1 0