epi2me-labs/modbam2bed

Diffrent output size for different insert bams?

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Hi,

As far as I understand the output should include data for each CpG in the genome regardless of the coverage (as there are rows with score of 0 at column 11). If that so, how come I get different outputs rows for different bam files?

cjw85 commented

As noted at the top of the README, modbam2bed is deprecated. Please use modkit.