Ercan Lab
We use C. elegans to study the structure and function of the X chromosome during dosage compensation, using a variety of high throughput sequencing methods
New York University - NYC
Pinned Repositories
2018_Paul_et_al
A colleciton of scripts used in the analysis of data in (Paul, et al 2018)
2019_Paul_et_al
A collection of scripts used in the analysis of data in (Paul, et al 2018)
2021_Breimann_et_al
Analysis scripts for FRAP analysis
2022_Kim_Jimenez_et_al
Analysis scripts for Jimenez et al. 2021
2022_Morao_et_al
2023_Kim_cohesin
ChIPseq
chromosome_conformation_capture
A variety of methods to analyze genome-wide chromosome conformation capture techniques, such as Hi-C and 3C-seq.
genome_information
Files that contain regions of interest, or specific subsets of the annotated genome. These are reference files used by our scripts.
RNAseq
Ercan Lab's Repositories
ercanlab/chromosome_conformation_capture
A variety of methods to analyze genome-wide chromosome conformation capture techniques, such as Hi-C and 3C-seq.
ercanlab/2018_Paul_et_al
A colleciton of scripts used in the analysis of data in (Paul, et al 2018)
ercanlab/2021_Breimann_et_al
Analysis scripts for FRAP analysis
ercanlab/ChIPseq
ercanlab/RNAseq
ercanlab/genome_information
Files that contain regions of interest, or specific subsets of the annotated genome. These are reference files used by our scripts.
ercanlab/2019_Paul_et_al
A collection of scripts used in the analysis of data in (Paul, et al 2018)
ercanlab/2022_Kim_Jimenez_et_al
Analysis scripts for Jimenez et al. 2021
ercanlab/2022_Morao_et_al
ercanlab/2023_Kim_cohesin
ercanlab/2024_Aharonoff_et_al
Scripts used in Aharonoff et al. 2024
ercanlab/2024_Breimann_et_al
Documentation and analysis scripts for Breimann et al. 2024
ercanlab/CNVs
C. elegans CNVs project
ercanlab/Misc_HTseq
ercanlab/street_et_al_2019
Data analysis scripts for Street et al. 2019