RTtools
is an R package for working with real-time fluorescence assay
data including useful tools for tasks such as importing and parsing
instruemnt export files, plotting spectra, and curve fitting and
modeling data for downstream numeric comparison.
import_traces()
imports real-time fluorescence dataview_traces()
generates plots of real-time fluorescence curvesfit_model
fits a logarithmic growth curve to the fluorescence curves and extracts numeric values for growth rate (rise time) and endpoint fluorescenceview_model
generates a plot of the model parameters endpoint vs rate
You can install the development version from GitHub with:
# install.packages("devtools")
devtools::install_github("eric-hunt/RTtools")