Pinned Repositories
cobrascape
constraint-based modeling for allelic variation (COBRA for fitness landSCAPEs)
diet_recommendation
Diet recommendation via gut metabolic modeling
IBPA-Collection-of-Reproducible-Code-and-Results
iEK1011_materials
Repository for updated and standardized model of Mycobacterium tuberculosis H37Rv, iEK1011 (and the BiGGs quality iEK1008 model)
metabolic-allele-classifiers
A flux balance analysis machine learning classifier for microbial GWAS
microbial_AMR_ML
Code repository for machine learning and computational analysis of large-scale microbial genomics data (https://rdcu.be/9rHj)
mwua
Python code implementing the MWUA algorithm and a Linear Program solver
tb_pangenome_workflow
Reproducible workflow for analyzing the pan-genome of 1595 M. Tuberculosis strains
IBPA-Collection-of-Reproducible-Code-and-Results
erolkavvas's Repositories
erolkavvas/microbial_AMR_ML
Code repository for machine learning and computational analysis of large-scale microbial genomics data (https://rdcu.be/9rHj)
erolkavvas/metabolic-allele-classifiers
A flux balance analysis machine learning classifier for microbial GWAS
erolkavvas/iEK1011_materials
Repository for updated and standardized model of Mycobacterium tuberculosis H37Rv, iEK1011 (and the BiGGs quality iEK1008 model)
erolkavvas/cobrascape
constraint-based modeling for allelic variation (COBRA for fitness landSCAPEs)
erolkavvas/diet_recommendation
Diet recommendation via gut metabolic modeling
erolkavvas/mwua
Python code implementing the MWUA algorithm and a Linear Program solver
erolkavvas/tb_pangenome_workflow
Reproducible workflow for analyzing the pan-genome of 1595 M. Tuberculosis strains
erolkavvas/IBPA-Collection-of-Reproducible-Code-and-Results