esgomezm
Repos - Small extracellular segmentation (BIIG-UC3M/FRU-Net-TEM-segmentation), deepImageJ plugin (deepimagej/deepimagej-plugin), pMoSS (BIIG-UC3M/pMoSS)
Instituto Gulbenkian de Ciência
Pinned Repositories
FRU-Net-TEM-segmentation
Deep-Learning-Based Segmentation of Small Extracellular Vesicles in Transmission Electron Microscopy Images
pMoSS
pMoSS (p-value Model using the Sample Size) is a Python code to model the p-value as an n-dependent function using Monte Carlo cross-validation. Exploits the dependence on the sample size to characterize the differences among groups of large datasets
deepimagej-plugin
The ImageJ plugin to run deep-learning models
models
CellTracksColab
A platform for compiling, analyzing, and exploring tracking data
microscopy-dl-suite-tf
Deep Learning segmentation suite designed for 2D microscopy image segmentation
Millennial
A minimalist Jekyll theme for running a blog or publication powered by Jekyll and GitHub Pages
opencv-python-reference
An (almost) fully comprehensive reference for OpenCV! 📷🤖
zidas2020_intro_DL
A first introduction to deep learning
ZeroCostDL4Mic
ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy
esgomezm's Repositories
esgomezm/microscopy-dl-suite-tf
Deep Learning segmentation suite designed for 2D microscopy image segmentation
esgomezm/CellTracksColab
A platform for compiling, analyzing, and exploring tracking data
esgomezm/Millennial
A minimalist Jekyll theme for running a blog or publication powered by Jekyll and GitHub Pages
esgomezm/awesome-readme
A curated list of awesome READMEs
esgomezm/Bacterial_image_analysis
Macros and methods to analyse bacterial bioimages
esgomezm/BiaPy-bioimage-io
BiaPy's BMZ connection
esgomezm/bioimage-io-models
Model repository for bioimage.io
esgomezm/bioimage.io
Website for the BioImage Model zoo -- a model zoo for bioimage analysis.
esgomezm/BIRL
BIRL: Benchmark on Image Registration methods with Landmark validations
esgomezm/DECODE
This is the official implementation of our publication "Deep learning enables fast and dense single-molecule localization with high accuracy" (Nature Methods)
esgomezm/DeepBacs
esgomezm/DL4MicEverywhere_Example
A toy example of a repository for DL4MicEverywhere
esgomezm/DMNet_Rina
esgomezm/esgomezm.github.io
A beautiful, simple, clean, and responsive Jekyll theme for academics
esgomezm/FundamentalsLigthBIA-ITQBNOVA23
esgomezm/hands_on_github
This repository is meant to provide a short introduction to GitHub in an informal way
esgomezm/HenriquesLab-bioRxiv-template
Please go to https://www.overleaf.com/latex/templates/henriqueslab-biorxiv-template/nyprsybwffws for the original template. This repo will disappear in few days
esgomezm/ImJoy
ImJoy: Deep Learning Made Easy!
esgomezm/list-of-update-sites
The update sites ImageJ knows about automatically
esgomezm/MicroscoPy
esgomezm/neubias-springer-book-2021
The repository of NEUBIAS textbook 2021
esgomezm/NEUBIAS_chapter_DL_2020
Tthis repository contains all the material for the chapter "Building a Bioimage Analysis Workflow using Deep Learning"
esgomezm/pMoSS
pMoSS (p-value Model using the Sample Size) is a Python code to model the p-value as an n-dependent function using Monte Carlo cross-validation. Exploits the dependence on the sample size to characterize the differences among groups of large datasets
esgomezm/spec-bioimage-io
Specification for the bioimage.io model description file.
esgomezm/Thesis-template
esgomezm/trial-nov
esgomezm/Usiigaci
Usiigaci: stain-free cell tracking in phase contrast microscopy enabled by supervised machine learning
esgomezm/VAMPIRE_open
open source version of VAMPIRE analysis : visually-aided morpho-phenotyping recognition
esgomezm/VisCy
computer vision models for single-cell phenotyping
esgomezm/ZeroCostDL4Mic
ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy