Pinned Repositories
kosudoku
MicroRunQC
Generate Metrics and Summary Statistics for Bacterial WGS
opentrakr
SeqSero
Salmonella serotyping from genome sequencing data
SeqSero2-galaxy
SeqSero2
snp-pipeline
SNP Pipeline is a pipeline for the production of SNP matrices from sequence data used in the phylogenetic analysis of pathogenic organisms sequenced from samples of interest to food safety.
Enterococcus_Mobile_Elements
Identification of Mobile Elements in Enterococcae with a Focus on AMR Genes
estrain's Repositories
estrain/MicroRunQC
Generate Metrics and Summary Statistics for Bacterial WGS
estrain/kosudoku
estrain/opentrakr
estrain/SeqSero
Salmonella serotyping from genome sequencing data
estrain/SeqSero2-galaxy
SeqSero2
estrain/snp-pipeline
SNP Pipeline is a pipeline for the production of SNP matrices from sequence data used in the phylogenetic analysis of pathogenic organisms sequenced from samples of interest to food safety.