Parallel implementation of OrthoMCL
We have reimplemented the sections of OrthoMCL that rely on databases. This way, OrthoMCL could be ran in parallel for a large number of genomes.
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Please cite PorthoMCL paper if you use it in your research :
PorthoMCL: Parallel orthology prediction using MCL for the realm of massive genome availability
Ehsan Tabari and Zhengchang Su
Big Data Analytics 2017 2:4 DOI: 10.1186/s41044-016-0019-8