Java implementation of the phylogenetic motif identification algorithm
Phylogenetic motifs (PMs) predict protein functional site predictions from sequence alignments. Their predictive power has been demonstrated in many investigations, especially as applied to ligand-binding and active site regions. The software miniMINER is a streamlined and self-contained tool for PM identification.
You don't need to compile the code, the executable jar file is included in the repository
Check the Wiki pages for the Manual and usage