/ivadomed

This repository adds additional functionality to the ivadomed repository on the collaborative IVADO medical imaging project between the Mila and NeuroPoly labs.

Primary LanguagePythonMIT LicenseMIT

ivadomed is an integrated framework for medical image analysis with deep learning.

The technical documentation is available here. The more detailed installation instruction is available there

Installation

ivadomed requires Python >= 3.7 and < 3.10 as well as PyTorch == 1.8. We recommend working under a virtual environment, which could be set as follows:

python -m venv ivadomed_env
source ivadomed_env/bin/activate

Install from release (recommended)

Install ivadomed and its requirements from Pypi <https://pypi.org/project/ivadomed/>__:

pip install --upgrade pip
pip install ivadomed

Install from source

Bleeding-edge developments builds are available on the project's master branch on Github. Installation procedure is the following:

git clone https://github.com/neuropoly/ivadomed.git
cd ivadomed
pip install -e .