This repository gives a neat example of how to use umap to do dimensionality reduction.
Demo data is from a Science paper:
Wannan Yang, Chen Sun, Roman Huszár, Thomas Hainmueller, Kirill Kiselev, György Buzsáki. “Selection of experience for memory by hippocampal sharp wave ripple.” Science 383, 1478-1483 (2024).
Tutorial code is based on the the demo code written by Wannan Yang. I want to give a shout-out to her efforts.
Original code: https://colab.research.google.com/drive/1qwruNxqS20xIl7sXYwjUA5zXKLTMWuTz?usp=drive_link#scrollTo=h4KY-DAgWZgE
Detailed Info: https://winnieyangwannan.github.io/RippleTagging/projects/1_project/