ethering
Senior Computational Biologist in the Haerty Lab, Earlham Institute. I'm interested in Conservation and Population Genomics.
Earlham InstituteNorwich, UK
Pinned Repositories
361Division
361 Division - Scientific Training, Education and Learning
asset
assembly evaluation tool
basespace-help
BaseSpace Docs Repo
bioruby-samtools
Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-
bioruby-svgenes
SVG format genome browser style pictures
ethering.github.io
GenomeHelper
KAT
The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra.
RAT
scater_1.8.4_wrappers
Wrapper scripts for scater v1.8.4, plus Galaxy wrappers for scRNA-seq training
ethering's Repositories
ethering/RAT
ethering/GenomeHelper
ethering/scater_1.8.4_wrappers
Wrapper scripts for scater v1.8.4, plus Galaxy wrappers for scRNA-seq training
ethering/361Division
361 Division - Scientific Training, Education and Learning
ethering/asset
assembly evaluation tool
ethering/basespace-help
BaseSpace Docs Repo
ethering/bioruby-samtools
Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-
ethering/bioruby-svgenes
SVG format genome browser style pictures
ethering/ethering.github.io
ethering/KAT
The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra.
ethering/ChalaraSecretomeAnalysis
ethering/CharlaraSecretomeJavaCode
ethering/cluster_demo
ethering/Dsuite
Fast calculation of the ABBA-BABA statistics across many populations/species
ethering/EI_scRNAseq_course
Materials for the single-cell RNA Seq course held at EI
ethering/FunSeq2
A flexible framework to annotate and prioritize cancer somatic mutations.
ethering/gee_fu
An extensible Ruby on Rails web-service application and database for visualising HTGS data
ethering/gee_fu_data
ethering/gift_assembly_paper
ethering/h_pseu_analysis
ethering/HyDe
Hybridization detection using phylogenetic invariants
ethering/MappedSamRecords_arabidopsis
ethering/NucBreak
Location of structural errors in a genome assembly and structural variations between a pair of genomes
ethering/parsley_root
Earlahm Institute CELLGEN fork of Pipeline for Analysis of Ribosomal Locus Evolution in Yeast (PARsLEY)
ethering/pipeline-structural-variation
Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data
ethering/read_docs
ethering/scripts
Scripts for analysis used during the course
ethering/Solexa
Set of modules for working with htgs reads and related software, maq, Bowtie etc
ethering/tools-iuc
Tool Shed repositories maintained and developed by the Intergalactic Utilities Commission