etkayapar

PhD Student working on Lepidoptera Phylogenomics

Lund UniversityLund, Sweden

Pinned Repositories

2023-heraklion-advanced-numpy
Language:Jupyter Notebook00
2023-heraklion-dataviz
Language:Jupyter Notebook00
2023-heraklion-git
Language:Python00
2023-high-performance-python
Language:Jupyter Notebook00
bamRefine
Small program to mask positions that are likely to result in PMD artifact from a BAM file using a predefined SNP catalog
Language:Python2 0 110
biopython
Official git repository for Biopython (originally converted from CVS)
Language:Python0 0 00
BIOR93_phylo_2023
10
BIOR93_phylo_2024
00
DivA
Detection of Non-homologous and Very Divergent Regions in Protein Sequence Alignments
Language:Python0 0 00
phylo_scripts
Bunch of little scripts I use to make my life easier
Language:Awk00

etkayapar's Repositories

etkayapar/bamRefine
Small program to mask positions that are likely to result in PMD artifact from a BAM file using a predefined SNP catalog
Language:Python2 0 110
etkayapar/BIOR93_phylo_2023
10
etkayapar/2023-heraklion-advanced-numpy
Language:Jupyter Notebook00
etkayapar/2023-heraklion-dataviz
Language:Jupyter Notebook00
etkayapar/2023-heraklion-git
Language:Python00
etkayapar/2023-high-performance-python
Language:Jupyter Notebook00
etkayapar/biopython
Official git repository for Biopython (originally converted from CVS)
Language:Python0 0 00
etkayapar/BIOR93_phylo_2024
00
etkayapar/DivA
Detection of Non-homologous and Very Divergent Regions in Protein Sequence Alignments
Language:Python0 0 00
etkayapar/extract-COI
Extract COI sequences from genome assemblies with blast
Language:Python00
etkayapar/phylo_scripts
Bunch of little scripts I use to make my life easier
Language:Awk00
etkayapar/PMDtools
Compute postmortem damage patterns and decontaminate ancient genomes
Language:Python0 0 00
etkayapar/SRAdb
Git mirror of Bioconductor SRAdb package
Language:R0 0 00
etkayapar/dwm
My fork of slightly customized dwm with several patches applied
Language:C