Code for the ROACH CUKIDS readout and analysis.
This code is provided in the hope that it may be useful to others, but is still very much a work in progress. If you are interested in replicating this readout system, it is recommended to wait a few months for it to mature into a more readily usable state.
- Currently kept here: https://github.com/gitj/kid_readout_fpga
=== Libraries used which should be installed ===
Currently running on CentOS 6.5 Python 2.7.6
./configure –prefix=/home/local
create /etc/ld.so.conf.d/python27.conf with /home/local/lib in it
Make sure tcl tk headers were installed (they weren't). Use package manager to get tcl-devel and tk-devel packages
do same ./configure –prefix=/home/local
make install
setuptools-2.0
python2.7 setup.py install
pip 1.4.1
download get-pip.py
python2.7 get-pip.py
numpy 1.8
pip install numpy
scipy 0.13.2
pip install scipy
matplotlib 1.3.1
pip install matplotlib
gave some complaint about installing an externally hosted file, who cares
ipython 1.1.0
pip install ipython
SIP 4.15.3
pip install SIP fails as expected because it doesn't use setup.py so….
mkdir /home/local/dl/build # should have done this before
pip –build=/home/local/dl/build install SIP #fails
cd /home/local/dl/build/SIP
python2.7 configure.py
make install
ran into obnoxious compatibility issues with latest SIP and PyQt 4.10.3, I thought it was just picking up the wrong sip.h, but even when manually renaming that etc. it still croaked. tried a few combos until finding one that seems to work: sip 4.14.7
python2.7 configure.py
make install
pyqt 4.9.6
configure.py –qmake=/usr/lib64/qt4/bin/qmake -k
This didn't work because it created some weird static libraries that couldn't be imported
python2.7 configure.py –qmake=/usr/lib64/qt4/bin/qmake -g –verbose
make install
seems to work (ipython –pylab=qt produces a plot)
katcp 0.5
pip install katcp
pyzmq-14.0.1
pip install pyzmq
Jinja2-2.7.1.tar.gz
pip install jinja2
corr (for katcp_wrapper)
just copy corr directory to /home/local/lib/python2.7/site-packages and remove .pyc files
lmfit 0.7.2
pip install lmfit
sphinx 1.2
pip install sphinx
pandas 0.12
pip install pandas
scikit-learn 0.14.1
pip install scikit-learn
netcdf4 1.0.7
pip install netcdf4
valon
copy from ~readout/lib and remove .pyc files
or git clone https://github.com/gitj/ValonSynth.git
and python setup.py install
qdr
copy qdr.py from gjones/qdr.py to conda environment sitepackages
pyserial 2.7
pip install pyserial
spyder 2.2.5
pip install spyder
sympy 0.7.4
pip install sympy
=== Structure === The project structure is as follows: repository_base/ kid_readout/ init.py utils/ init.py analysis/ init.py resources/ apps/ scripts for taking and analyzing data ppc/ ROACH PPC code equipment/
=== Install === To install the kid_readout package, you need to add the directory in which you cloned this repository to your PYTHONPATH environment variable. To be more specific, if the repository lives in /home/user/kid_readout.git, add this line to your .bash_profile (or .bashrc) file: export PYTHONPATH=$PYTHONPATH:/home/user/kid_readout.git Then, statements like from kid_readout.utils import whatever should work.