Legacy scripts for doing subtomogrphic analysis
docker run --rm docker.io/ezralanglois/subtomo -c "import EMAN2"
-
$HOME/Downloads
is the local directory that contains the HDF files -
/opt/scripts/sta_extract_coords.py is the script that extracts coordinates from the HDF file
docker run -v$HOME/Downloads:/data --rm docker.io/ezralanglois/subtomo /opt/scripts/sta_extract_coords.py /data/INS_HG_22_g1_t3_noglucose_bound.hdf /data/INS_HG_22_g1_t3_noglucose_bound.csv