fac2003

Editor2PDF

Provides a mechanism to render an MPS editor to PDF automatically.

goby3

Releases 3.+ of the Goby High-throughput sequencing framework and tools.

MetaR

Simple Data Analysis language built with MPS. Generates R code. Metaprogramming in R, thus the name.

NextflowWorkbench

An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the Nextflow.io middleware. Includes dockerfile language and IDE-like support for docker.

variationanalysis

This repository holds the companion project to Goby3, used to train and evaluate deep learning models to call variations. This repository contains the Matcha framework to help train and evaluate deep learning models trained with semi-simulation. See docs below for details.

deeplearning4j

Suite of tools for deploying and training deep learning models using the JVM. Highlights include model import for keras, tensorflow, and onnx/pytorch, a modular and tiny c++ library for running math code and a java based math library on top of the core c++ library. Also includes samediff: a pytorch/tensorflow like library for running deep learn...

hackathon-2019-bullying-detection-model

Fine-tuning a FastAI NLP model to predict bullying in social media.

perceiver-multi-modality-pytorch

Implementation of Perceiver, General Perception with Iterative Attention, in Pytorch

repro_deepspeed_multi_modality_perceiver_stage_3

Reproduce issues for https://github.com/microsoft/DeepSpeed/issues/944

test1

test repository

fac2003/perceiver-multi-modality-pytorch

Implementation of Perceiver, General Perception with Iterative Attention, in Pytorch

fac2003/repro_deepspeed_multi_modality_perceiver_stage_3

Reproduce issues for https://github.com/microsoft/DeepSpeed/issues/944

fac2003/hackathon-2019-bullying-detection-model

Fine-tuning a FastAI NLP model to predict bullying in social media.

fac2003/test1

test repository

fac2003/attention-is-all-you-need-pytorch

A PyTorch implementation of the Transformer model in "Attention is All You Need".

fac2003/DeepSpeedExamples

Example models using DeepSpeed

fac2003/fast-transformer-pytorch

Implementation of Fast Transformer in Pytorch

fac2003/llm2vec

Code for 'LLM2Vec: Large Language Models Are Secretly Powerful Text Encoders'

fac2003/MPS

JetBrains Meta programming System

fac2003/nanoGPT

The simplest, fastest repository for training/finetuning medium-sized GPTs.

fac2003/NYoSh

NyoSh languages and workbench

fac2003/NYoSh-runtime-support

Runtime support classes for NYoSh languages.

fac2003/nyosh.core

NYoSh Core. Set of languages we reuse from the NYoSh workbench.

fac2003/pytorch-cifar

95.16% on CIFAR10 with PyTorch

fac2003/pytorch-classification-uncertainty

This repo contains a PyTorch implementation of the paper: "Evidential Deep Learning to Quantify Classification Uncertainty"

fac2003/pytorch-transformer

pytorch implementation of Attention is all you need

fac2003/pytorch_polkadots

fac2003/StackNN

A PyTorch implementation of differentiable stacks for use in neural networks.

fac2003/ureg

Experimenting with CNN architectures for image classification and methods to improve training with small datasets (semi-supervised learning).

fac2003/variationanalysis-apps

DNANexus applications to process alignments and help develop or use neural-network based model callers.

fac2003/wide-residual-networks

3.8% and 18.3% on CIFAR-10 and CIFAR-100